Herpailurus yagouaroundi (jaguarundi): 121012233
Help
Entry
121012233 CDS
T07555
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03250
Viral life cycle - HIV-1
pyu04623
Cytosolic DNA-sensing pathway
pyu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121012233 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121012233 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
121012233 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyu03400
]
121012233 (SAMHD1)
DNA repair and recombination proteins [BR:
pyu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121012233 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
121012233
NCBI-ProteinID:
XP_040303047
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MQGADSDQPFKRPRRDGSPRTPPNIPSAAAESSPGPKLHRDYQTWGPEQVCCFLKRSGFS
DPGLLERFRGNKITGSILLHLNESDLESLGISTLGDRKKLHNYIQQLKEIHVDAMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVEWTHEQGSVKM
FEHLVNSNGLKAVMEHYGLIPEEDICFIKEQITGPLESPIKDSLWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFIKFARVCEVDDRKRICTRDKEVGNLY
DMFHTRTSLHRRAYQHKVGNIIDTMITDAFLKADPYIEIVGAEGKKYHISTAIDDMDAFT
KLTDNIFLEILYSSDPKLNAAREILKKIECRNLYKYVGETKPKGTTKIEKENYKSLPEDL
ANSKPKDILIETELKAEDFIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVRITKDQVSE
LLPERFAEQLIRVYCKKTDAKSLFAAHQYFVHWCLIRNFTKPQDSDVVAPLITPRKEEWK
NPDSAQSPDHLQKVSKFKTRLFPDDSV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagcggactctgaccagcccttcaaacggccccgacgcgatggcagcccgaga
accccgccaaacatcccttccgcggcggcggagagctccccgggccccaaactccaccgc
gactaccagacctggggcccggagcaggtgtgctgcttcctaaagcgcagtggcttcagt
gatcccggactgctggaacgcttccgaggaaataaaatcacaggttcaatactgctccat
cttaatgagtctgatcttgaaagtcttggaataagtactttgggtgacagaaagaagctg
cataattatatccagcaactgaaggaaattcatgttgatgcaatgaaggtcattaatgat
cctatccatggccacattgaactccaccctctcctcatccgaatcatcgacacacctcaa
tttcagcggcttcgatatatcaaacagttgggtggcagttactatatttttccaggcgct
tcgcacaaccgatttgagcacagtctaggcgtagggtatctagcgggatgtcttgttcgt
gcactgcgtgaaaaacaaccagagctgcagataagtgaacgggatgtgctctgtgttcag
attgctggcctctgtcatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttattccacttgctcgcccagatgtggaatggacgcatgaacagggctcagtgaagatg
tttgagcacctagttaattctaatggtctcaaagctgtcatggaacattacggtctcatc
cctgaagaagatatatgctttatcaaggaacaaattacaggaccacttgaatcaccaatc
aaagattctttgtggccatacaaagggcgtcctaaagagaaaagcttcctttatgagata
gtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattaccagcgctttatcaaatttgcccgtgtt
tgtgaagtagatgataggaagcgtatttgtactagagataaggaggttgggaatctgtat
gacatgttccatacccgtacctctttgcaccgcagagcttatcaacacaaagttggcaac
atcattgatacaatgattacagatgctttcctcaaagcagacccctacatagaaattgta
ggtgctgaaggaaaaaagtatcacatttctacggcaattgatgacatggatgccttcact
aagctcacagataacattttcctggagattttatattcttctgatcccaaactgaatgca
gcacgagagattttaaaaaaaattgaatgccgtaatctatacaagtatgtgggtgagact
aaaccaaaaggaacaacaaaaattgaaaaggaaaattataaaagccttccagaagatctc
gctaattctaaacctaaggacatcttgatagaaactgaactaaaggctgaagacttcata
gtggatgttatcaacatggattatggaatggaagacaagaatcctattgatcatgttcgc
ttctattgtaagagtgacctcagcaaagcagtcaggattactaaagatcaggtttcagag
cttttgccagagaggtttgcagagcagctaattcgcgtatactgcaagaaaactgatgca
aagagcttgtttgctgcacaccagtactttgttcattggtgcttaatcagaaacttcacc
aagccacaggatagtgatgttgtggctccacttataacacctcgaaaagaggagtggaag
aacccggattcagcccagagcccagatcacttacaaaaagtgtccaaatttaaaacccgg
ctttttccagatgactctgtgtga
DBGET
integrated database retrieval system
