Herpailurus yagouaroundi (jaguarundi): 121012536
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Entry
121012536 CDS
T07555
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyu03021
]
121012536 (CHD1)
03036 Chromosome and associated proteins [BR:
pyu03036
]
121012536 (CHD1)
Transcription machinery [BR:
pyu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121012536 (CHD1)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121012536 (CHD1)
SLIK complex
121012536 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
121012536
NCBI-ProteinID:
XP_040303748
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MDTAMKKVLETVVENQERKLAPTIHHPIMHFKLIYSQSDDDSGSASGSGSGSSSGSSSDG
SSSQTGSSDSESGSESGSQSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAML
KKQQQQQQHQASSNSGSEEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSE
SEEERDKSSCDETESDYEPKNKVKSRKPQNRSKAKNGKKILGQKKRQLDSSEEEDDEEDY
DNDKRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRK
GATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRG
MKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAG
YPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVA
LKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH
EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLK
FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP
LQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKS
LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI
KPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLK
YRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSD
WNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGK
TVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENE
PGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELE
EIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRETIKG
FSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSS
GTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK
AAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTR
ADYLIKLLSKDLARKEAQRLSGAGGSKRRKARAKKNKALKSIKVKEEIKSDSSPLPSEKS
DEDDDKDEITSVKHPNKKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKRELKE
KEDKKDLKEKDFKEKRENKVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITA
SGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIG
DHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNS
SLNAQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRP
YSSFSNGKDHRDWDHYKQESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHS
DHRLHSDHRASSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSV
EHKSTPEHTWSSRKT
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggacacagcgatgaagaaagtgttagaaacagtagtggagaatcaagagagaaagctg
gctcctaccatccaccatcccatcatgcacttcaagctcatatacagccagtcggatgat
gattctgggtcagcttcaggctctggatctggttcaagttctggaagcagtagtgatgga
agcagtagccaaacaggtagcagtgactctgaatctggatctgaatcgggcagtcagtca
gagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaagttgat
ggagctgagttttggaaatctagccctagtattctggctgttcagagatctgcaatgctc
aagaagcagcagcagcagcagcagcatcaagcttcatctaatagtggatcagaagaggat
tcttccagcagtgaagattctgatgactcatcaaatgaagtcaaaaggaaaaaacataaa
gatgaagattggcaaatgtctgggtcaggatctccatctcaatctggctcagattcagaa
tctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgattatgagccaaaa
aacaaagttaaaagcaggaaacctcaaaatagatctaaggcaaagaatggaaagaaaatt
cttggacaaaaaaagagacagcttgattcatctgaggaggaggatgatgaagaagattat
gataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctataaagaagat
gaagaaatgaaaacagattccgatgacctactggaagtctgtggggaggatgttcctcaa
cctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggattgggagaaaa
ggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaatgca
ggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaaggatgg
tcccatatccacaatacttgggagacagaagaaacccttaagcagcagaatgttagagga
atgaaaaaattggataattataagaaaaaagatcaggagacaaaaagatggttgaaaaat
gcttctccagaagatgtggaatattataattgccagcaagaacttacagatgatctacac
aaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtcagcagctggt
tatcccgattattattgcaaatggcagggccttccatactcagagtgcagctgggaggat
ggagccctaatttccaaaaagtttcaagcatgcatagatgagtattttagcaggaatcaa
tcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagatttgtagcc
ctaaagaagcagccatcctacattggaggacatgagagtttagaattaagagattatcaa
ctaaatggtttaaattggcttgctcattcttggtgcaaaggaaatagttgcatacttgct
gatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttgtttcat
gagcatcaattatatggaccttttctgttagtagtaccactctccactcttacttcctgg
caaagggaaattcagacatgggcttctcagatgaatgctgtggtctatttaggtgacatt
aacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaacggttaaaa
tttaatatacttttaacaacttacgaaattttattgaaggataaggcattccttggaggt
ctgaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgatgactctctt
ctgtataaaactttaatagactttaaatccaatcaccgtctccttattactggaactcct
ctacagaactcccttaaagagctgtggtctttgctacatttcattatgccagaaaagttt
tcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggttatgcaagc
ctccacaaggagcttgaaccatttctgttacgcagagttaaaaaagatgtggaaaaatct
cttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaacagtat
tacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggcagtacc
tcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctacctcatt
aaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatccgt
agtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaacgaggcaat
agagttcttattttttctcaaatggtgcggatgttagacatacttgcagaatatttgaaa
taccgtcaattcccctttcaaagattagatggatcaataaaaggggagctgagaaaacaa
gcactagatcattttaatgctgaaggatcagaggatttctgctttttgctttccacaaga
gctggaggtctaggaattaatttagcctctgctgatactgttgttatatttgattccgat
tggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcagaagaaa
caggtgaatatttatcgtctagttactaagggatcagttgaagaggatattcttgaaagg
gccaaaaagaagatggttttagatcatcttgtgattcagagaatggacacaactgggaag
acagtactacatacaggttctgccccgtcaagctctactcctttcaataaagaagaatta
tcagctatcttaaagtttggtgctgaggaactttttaaggaacctgaaggagaagaacaa
gaaccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaaaatgaa
ccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgccaacttttca
aatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgggaggaa
ataattcctgaagatcaacgaagacgattagaagaggaagaaagacaaaaggaacttgaa
gaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagttttaatggcagt
gaagggaggcgcagtagaagtaggagatattctggatctgatagtgactcgatctcagaa
aggaaaaggccaaagaaacgtggaagaccacggactatccctcgggagactatcaaagga
tttagtgatgcagaaattcggcggtttatcaagagttacaagaagtttggtggccctctg
gaaagattagatgcaattgctcgggatgctgaattagttgataagtcagagaccgacctc
agacgactaggagaattggtacataacggttgcattaaagctctaaaggataattcttca
ggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattccgaatatca
ggagtacaggtgaatgccaagctcgtcatctcccatgaagaagaattgataccattgcat
aaatccattccttcagatccagaagaaagaaaacagtatactatcccatgccatacaaag
gcagctcattttgatatagactggggcaaagaagatgattccaatttgttaattggtatc
tacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctcagtctaaca
cacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttgcagacacgt
gcagactacctcatcaaattacttagtaaagatcttgcaagaaaagaagctcagagactt
tctggtgcaggaggttcaaagaggagaaaagcaagagctaagaagaataaagcattgaag
tctataaaagtgaaagaagaaataaagagtgattcttcacccttgccctcagagaagtct
gatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaaattaaa
acagaaagagacagtgaagaaagacctgagccagatgtttttataaagaaggaatcagaa
gaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggagctaaaagaa
aaagaggataagaaagatttaaaggaaaaagattttaaagagaaaagagaaaacaaagta
aaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaatccaagtct
gatagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcatatcacagca
agtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagacattcagc
atttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgaa
aaaggcctttcagaaagagaacaactggaacatactagacagtgtttaataaaaattgga
gaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaagcagtggaga
aaaaacctgtggatttttgtatctaagtttacggagttcgatgcaagaaaattacataag
ttatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagc
agcctgaatgctcaagtaattagaaatccagatgtggaaagattaaaagagaatacaaat
cacgatgatagcagcagggacagttattcatctgatagacacttatctcagtatcatgat
catcataaagaccgacatcagggagattcttacaaaaagagtgactctaggaaaagaccc
tattcttcctttagtaatggcaaagatcatcgtgactgggatcattacaagcaagaaagc
aggtattatagtgatagagagaaacacagaaaactggatgatcacaggagtagagatcac
aggtcaaatttggaaggaagtttaaaggacagatctcattctgatcatcgttctcattca
gaccatcggttgcattcagaccatcgggcaagttctgaatatacacaccataaatcttcc
agggattataggtatcactcagattggcagatggaccacagagcttccagtagtggcccc
agatcaccactagatcagaggtctccttatggctccagatctccatttgaacactcagtt
gaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
