Puma yagouaroundi (jaguarundi): 121013262
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Entry
121013262 CDS
T07555
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03082
ATP-dependent chromatin remodeling
pyu04714
Thermogenesis
pyu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121013262 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121013262 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121013262 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pyu03000
]
121013262 (ARID1B)
03021 Transcription machinery [BR:
pyu03021
]
121013262 (ARID1B)
03036 Chromosome and associated proteins [BR:
pyu03036
]
121013262 (ARID1B)
Transcription factors [BR:
pyu03000
]
Eukaryotic type
Helix-turn-helix
ARID
121013262 (ARID1B)
Transcription machinery [BR:
pyu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121013262 (ARID1B)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121013262 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
121013262
NCBI-ProteinID:
XP_040304719
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLTPQAQYLPPQPQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATL
SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP
ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSP
HPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGI
NANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP
TVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMM
HQPDQYGQGSFPGMNQSGLMASSSPYSQPVNNSSGLMNTQAPPYSMAPNMVNSSTDMMSP
GESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFH
GDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSP
VSSLPAVGKKPLDLFRLYICVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYI
QYLFAFECKIERGEEPPPEVFSTADTKKQPKLQPPSPANSGSLQGPQTPQSTSSNSMADV
QGDLKPPTPASTPHGQMTPMQGGRSGTVSVHDPFSDASDSSFPKRNSMTPSAPYQQSMSM
PDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSVQDVYNQSPSGALSGLGMGRQ
QFPYGAGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH
EGDMYNMQFGSQQQEMYNQYGSSYSGPDRRPIQGQYPYPYNRERVQGPGQMQPHGIPPPM
MGGPMQSSSSEGPQQSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMLVPEQRIN
HESQWPSHVSQRQPYMSSPASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRM
SPSKSPFLPSLKMQKVLPTVPTAQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKIT
SKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFSLSQLSGFLELLVEYF
RKCLIDIFGILTEYEVGDPSQKALDHNAGKRADGQSLADESGKEEEGTECVDEEDDEEDD
EEDDEEEDDGKTETEEKSSSTLASPNATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRS
DKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKEQEGKG
DSDEQQEKSIIATIDDVLCARPGALPEDANPGTQTESGKFPFGIHQAKSHRNIKLLEDEP
RSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHH
EHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTES
ICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATP
PFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFL
EDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLL
DISISAVLNSLVASVICDVLFQIGQL
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggatcctatggtgatgaagaggccgcagttatacgggatgggcagtaaccctcattct
cagcctcagcagagcagcccttaccccggaggctcctacggtcccccagggccacagcgc
tatccaatcagcatccagggtcggaccccaggggccatgggaggaatgcagtacccacag
cagcagatgccgcctcagtatggacagcaaggcgtgagtggttactgccagcagggccag
cagccttactacaaccagcagccgcagcccccgcacctcaccccgcaggcgcagtatctg
ccgccccagccccagcagcggtaccagccccagcaggacatgtctcaggaaggctatgga
actaggtctcaacctcctttggctcctggaaaacctaaccacgaagacttgaacttaata
caacaagaaagaccatcaagtttaccagttgaagtcttgacctcggaggataccgccttt
ggactcaaggacctgtctggctccattgatgacctccccacgggaacggaagccactctg
agctcagcagtcagtgcgtctggatccacgagcagccaaggggatcagagcaaccctgct
cagtcgcctttctctccacacgcatccccccatctctccagcatccccgggggcccgtcg
ccttctcctgtcggctctcccgtgggaagcaaccagtcacgatctggcccaatttctccc
gcaagtattccaggcagtcagatgcctcctcagccacctgggagccagtcagaatccagt
tcccatcctgccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcaca
caaagaaaccctcagatgtctcaatatggacctcaacagacaggaccatccatgtcgcct
catccttctcctggaggccagatgcatcctggaatcagtagctttcagcagagtaactca
agtgggacttatggtccgcagatgagccagtatggaccacaaggtaactactccagaccc
ccaacgtatagtggggtgcccagtgcgagctacagcggcccagggcccggcatgggcatc
aatgccaacaaccagatgcacggacaagggccaagccagccgtgtggtgctatgcccctg
ggacgaatgccatcagctgggatgcagaacaggccgtttcctggaaatatgagcagcatg
acccccagctctcccggcatgtcccagcagggagggccaggaatggggccaccgatgcca
accgtgaaccgtaaggcacaggaggcagctgccgcagtgatgcaggccgctgcaaactcg
gcacaaagcaggccaccatacattaggtcgcctgcttatcccagccagtctggggctggc
ggacgccccatgttttcttcccagcaccccaactatggcaactctcaggctcccatgatg
caccagcctgaccagtacgggcaaggcagtttcccgggcatgaaccagagtggacttatg
gcttccagctctccctacagccagcccgtcaacaacagctctgggctcatgaacacccag
gcacccccctacagcatggcgcccaatatggtgaacagctcaacagatatgatgtctcct
ggcgaatccaaattgcccctgcctctcaaagcagacggtaaagaagaaggcactccacag
cccgagagcaagtcgaaggatagctacagctctcagggtatatctcagcccccaaccccc
ggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctcatttcat
ggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagccctaag
tccagctcatccaccaccactggggaaaagatcacaaaggtgtatgagttggggaatgag
ccggagagaaagctgtgggtcgaccgataccttaccttcatggaagagagaggctccccc
gtctccagtctgcccgcggtgggcaagaagcccttggacctgttccggctctacatctgc
gtcaaagagatcggaggtttggcacaggttaataaaaacaagaagtggcgtgagctggca
accaacctaaatgttggcacttcaagcagtgcagcgagctccctgaaaaagcagtatatc
cagtacctgtttgcctttgagtgcaagattgagcgcggggaggagcccccgccggaagtc
ttcagcaccgcggacaccaagaagcagccgaagctccagccgccctctcctgcgaactca
gggtccttgcaaggtcctcagaccccccagtcaaccagcagcaattcgatggcagacgta
caaggcgacctgaagccacctaccccagcgtctaccccgcatggacagatgaccccaatg
caaggtggaagaagcggtacagtcagcgtgcacgacccgttctcagacgccagtgactca
tcgttcccaaaacggaactccatgaccccgagcgccccttaccagcagagcatgagcatg
cctgacgtgatgggcaggatgccctatgaacccaacaaggaccccttcggtggaatgaga
aaagtgcctgggagcagtgagccctttatgactcaaggacagatgcccactagcagtgtg
caggacgtgtataaccagagtccctccggagcactatccggtctgggcatggggcggcag
cagtttccctacggagccggctacgaccgaaggcacgaaccttacgggcagcagtaccca
ggccaaggccctccctcaggacagccgccatatggaggacaccagcccggcctgtatcca
cagcagccgaattacaaacgccatatggacggcatgtatgggcctccggccaaacgccac
gagggagacatgtacaacatgcagttcggcagccagcagcaagagatgtataaccagtac
ggaagttcctactccggaccggacaggaggcccatccaggggcagtatccgtacccctac
aacagagagagggtgcagggccccgggcagatgcagccgcacgggatcccgcctcccatg
atgggcggccccatgcagtcgtcctccagcgaagggcctcagcagagcatgtgggcgacg
cgcaatgatatgccttacccctaccagaaccggcagggccccgggggcccggcccaggcc
ccgccgtatccaggcatgaaccgcacggatgatatgctggtacctgagcaaaggatcaat
cacgagagccagtggccttcccacgtcagccaacgtcagccttatatgtcctctcccgcc
tccatgcagcccatcacgcgcccgcctcagtcatcctaccagacgcctccatcactgcca
aaccacatctccagagcccccagccccgcgtccttccagcgctccctggagagccgcatg
tctcccagcaagtctccctttctgccctctctgaagatgcagaaggtcctgcccaccgtc
cccacggcccaggtcacgggcccgcccccccagccacccccgatccgaagggagatcacc
ttccctcctggctcagtcgaggcatcgcagccagtcttgaaacaaaggcgaaagattacc
tcaaaagatatcgttactcctgaggcctggcgtgtgatgatgtccctcaagtccggtctt
ttggctgaaagtacatgggctctggacaccattaacattctcctgtacgatgacagcact
gtcgccaccttcagtctctcccagctgtccggatttctggaacttttagtagagtacttt
agaaaatgcctaattgacatttttggaattcttacggaatatgaggtgggagaccccagc
caaaaagcacttgatcacaatgcggggaagagagctgacggccagtccttggccgacgag
tctgggaaagaggaggagggcaccgagtgtgtggacgaggaggacgacgaggaggacgac
gaggaggacgacgaggaggaggacgacgggaagacggagaccgaggagaagagcagctcg
actctggcctctcccaacgccactgcggatccgaaggaaaagcccaggcaagctagcaag
ttcgacaagctcccgataaagatagtcaaaaagaacaacctgtttgtggtcgaccgatct
gacaagctgggtcgtgttcaggagttcaacagcggacttctgcactggcagcttggcggg
ggggacaccaccgagcacatccagactcactttgagagcaagatggaaattcctcctcgc
aggcgtccacctccccctctgagctccaccgggaggaagaaagagcaggaaggaaaaggc
gattctgacgagcagcaagagaagagcatcatcgcaaccatcgatgatgtcctctgtgct
cggccgggggcgctgcccgaagatgcgaaccctggtacccagaccgagagcgggaagttt
ccctttgggatacatcaagccaaaagtcaccggaacatcaagctgctggaggacgagccc
aggagccgagacgagacccctctctgcaccatcgcgcactggcaggattccctggccaag
cgctgcatctgtgtgtcgaatattgtccgtagcttgtcttttgtgcctggcaatgacgcc
gaaatgtccaaacatccaggcttggtgctgatcctggggaagctgattctccttcaccac
gagcatccggagaggaagcgagcgccgcagacctacgagaaagaggaagacgaggacaaa
ggggtggcctgcagcaaagacgagtggtggtgggactgcctggaggtcctaagggacaac
acgctggtcacgttggccaacatttccgggcaactagacttgtctgcgtacacagaaagc
atctgcctgccgattctggacggcttgctgcactggatggtgtgcccgtcggcagaggca
caagacccctttccaaccgtgggacccaactctgtcctgtcgcctcagagacttgtgctg
gagaccctctgcaaactcagtatccaggacaacaacgtggacctgatcttggccacgcct
ccatttagtcgccaggagaaattctacgctacgttagttaggtacgttggggatcgcaaa
aacccagtctgtcgagaaatgtccatggcgctcttatcgaaccttgcccaaggggacgcg
ctggcagcaagggcaatagctgtgcagaagggaagcatcggaaacttgataagcttccta
gaggacggggtcaccatggcccagtatcagcagagccagcataacctcatgcacatgcaa
ccgccgcctctagaaccacctagcgtggacatgatgtgcagggcggccaaggctctgctg
gccatggccagggtggacgagaaccgctcggaattccttctgcacgagggccgattgctg
gatatctcgatatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgtactg
tttcagattgggcagttatga
DBGET
integrated database retrieval system
