Puma yagouaroundi (jaguarundi): 121013545
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Entry
121013545 CDS
T07555
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03082
ATP-dependent chromatin remodeling
pyu04714
Thermogenesis
pyu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121013545 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121013545 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121013545 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyu03021
]
121013545 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pyu03036
]
121013545 (SMARCA2)
Transcription machinery [BR:
pyu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121013545 (SMARCA2)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121013545 (SMARCA2)
Chromatin remodeling factors
BAF complex
121013545 (SMARCA2)
PBAF complex
121013545 (SMARCA2)
GBAF(ncBAF) complex
121013545 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121013545
NCBI-ProteinID:
XP_040305193
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGIHQMHKPMDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLLSGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQPQPQPQPPSQPQPQAQQPQQQAL
VNYNRPSGPGPELSGPNTPQKLPVPAPSGRPSPAPPAAAQPPAILQLQQKQSRISPIQKP
QGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQ
EVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNS
ILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGY
RKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRKRKKKAEEIAEGGE
SALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSD
SEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYS
ARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLG
KTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSL
VPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP
RRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI
IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK
DKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFEL
LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE
PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL
CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP
DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERL
TCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDK
DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPGNSQLEI
EGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL
CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDDSNEEEEEEDEEESESEAKS
VKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDDE
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccatccagggccctcgccagggcccgga
ccctctcctggaccaattcttggacctagtccaggacccggaccatccccaggttctgtc
cacagtatgatggggccgagtcccggacctcccagtgtctcacaccctatgccaacaatg
gggtctgccgacttcccgcaggaaggcatacatcaaatgcataagcccatggatggtatg
cacgacaaggggattgtagaagatatccattgtggatccatgaagggcaccggtatgcgg
ccaccgcacccaggcatgggtcctccccagagtccaatggatcaacacagccaaggctac
atgtcgccgcacccgtctccgctgggagccccagagcacgtctccagtcctatgtcgggg
ggcggcccgaccccaccccagatgccgcccagccagccggggcccctcctgtcgggcgat
ccgcaggcgatgagccagcccaacagaggtccctcgcctttcagccccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccgcggccagcccctccccgaa
acgctgcagcttgcagtgcaggggaaaaggacgttgcccggcatgcagcagccgcagccg
cagccccagccgccctcgcagccccagccgcaggcacagcagccgcagcagcaggccctt
gttaactacaacagaccatctggcccggggccggagctgagtggcccgaacaccccgcag
aagctgccggtgcccgcgcccagcggccggccctcgcccgcgccccccgccgcggcgcag
ccccccgccatcctgcagctgcagcagaagcagagccgtatcagccccatccagaaaccg
cagggcctggaccccgtggagatcctgcaggagcgcgagtacagactccaggctcgcata
gctcataggatccaagaactggaaaatctgcctggctctctgccaccagatttacgaacc
aaagcaactgtggagctgaaagcgcttcgcttactcaatttccagcgtcagctgagacaa
gaggtggtggcctgcatgcgacgagacacaaccctggagacggccctcaactccaaagca
tacaaacggagcaagcgccagaccctgagggaggcccgcatgacggagaaactggagaag
cagcagaagattgagcaggaaaggaagcgtcgacagaagcaccaggagtacctgaacagt
attttgcagcatgcaaaagattttaaggaataccatcggtctgtggccgggaagatccag
aagctgtccaaagcagtggcaacttggcacgccaacacggaaagagagcagaaaaaagag
acggagcgtatcgaaaaggagagaatgcgaagactgatggctgaagatgaagagggctac
agaaaactgattgatcaaaagaaagacaggcgtttagcttaccttttgcagcagactgat
gagtatgtggccaacctgaccaacctggtttgggagcacaagcaagcccaggccgccaaa
gagaagaagaagaggaggaagaggaagaagaaggccgaagagattgccgagggaggagag
tctgccctgggaccagacggagagcccatagatgaaagcagtcagatgagtgacctccct
gtcaaagtgactcacacagaaactggcaaggtcctgtttggaccagaagcacccaaagca
agtcagctggacgcctggttggagatgaatcctggttacgaagtggccccccgatccgac
agtgaagagagtgattctgattacgaggaggaggatgaagaggaggagtccagtcggcag
gacacggaagagaaaatactcctggatccaaacagtgaagaggtttctgagaaggatgcc
aagcagatcattgagacagcgaagcaagacgtggatgatgagtacagcatgcagtacagt
gccaggggctcccagtcctactacacggtggcccatgccatctcggagagggtggagaag
cagtccgccctcctcatcaatgggaccctgaagcattatcagctccagggcctggaatgg
atggtttccctgtataataacaatttgaacgggatcttagctgatgaaatggggctagga
aagaccatacagaccattgccctcatcacttatctgatggagcacaaaagactcaatggc
ccctatctcatcattgttcccctttcgactctgtctaactggacatatgaatttgacaaa
tgggctccttctgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctccctt
gtcccccagctgcggagtggcaaattcaacgtcctcttgactacttatgagtacattatc
aaagacaagcacattcttgcaaagattcggtggaaatacatgatagtggatgaaggccac
cgaatgaagaatcaccactgcaagctgactcaggtcttgaacactcactatgtggccccc
agaaggatcctgttgaccgggaccccactgcagaataagctcccggaactctgggccctc
cttaacttcctcctccccacgatttttaagagctgcagcacgtttgaacagtggtttaat
gctccatttgccatgactggagaaagggtggacttgaatgaagaagaaactatattgatc
atcaggcgcctgcacaaggtgttgagaccatttttattgaggaggctgaagaaagaagtt
gaatcccagctgccagaaaaagttgaatatgtgatcaagtgtgacatgtcagccctgcag
aagattctctatcgtcatatgcaagccaaagggatcctcctcacagatggttccgagaag
gataagaaggggaaaggaggtgccaagacacttatgaacactattatgcagttgaggaaa
atctgcaaccacccatatatgttccagcacatcgaggaatcctttgctgaacacctgggc
tattcaaacggggtcatcaatggggctgagctgtatcgggcctcaggaaagtttgagctt
cttgatcgtattctgcccaaactgcgagctactaatcaccgcgtgctgcttttctgccag
atgacctcgctcatgaccatcatggaggattactttgcttttcggaacttcctctacctt
cgccttgacggcaccaccaagtctgaggaccgcgccgctctgctgaagaaattcaacgaa
cctgggtcccagtatttcatcttcttgctgagcaccagagctggcggcctgggcttgaac
cttcaggcagctgataccgtggtcatctttgacagtgactggaatcctcaccaggatcta
caagcacaagaccgagctcaccgcatcggccagcagaacgaggtccgggtgctgaggctg
tgcactgtcaacagcgtggaggaaaagattctcgcggccgcgaaatacaagctgaacgtg
gatcagaaagtgatccaggcgggtatgtttgatcagaagtcttcaagccacgagcggagg
gcattcctacaggccatcctggagcacgaagaagaaaacgaggaagaagatgaagtgccc
gacgatgagaccctgaaccaaatgattgctcgacgagaggaagaatttgatctttttatg
cgcatggacatggaccgacggagggaagatgccaggaacccaaagcgtaagccccgcttg
atggaggaagatgagctgccctcctggattattaaggatgatgccgaagttgaacggctc
acatgtgaggaagaggaggagaaaatatttggtaggggttctcgccagcgccgggacgtg
gactacagcgacgccctcacggagaagcagtggctgagggccatcgaagacggcaatttg
gaagaaatggaagaggaggtacggctcaagaagcggaaaagacgaagaaacgtggataaa
gatcccgccaaagaagacgtggaaaaagctaagaagagaagaggccgccctccagctgag
aaactatcccccaatccccccaaactgaccaagcagatgaacgcaatcattgataccgta
ataaactacaaagacaggtgtaacgtggagaaggtgcccggtaattctcagttggaaata
gaaggaaacagttcagggcggcagctcagtgaagtcttcattcagttaccttcaaggaaa
gagttaccagaatactatgaattaattaggaagccggtggatttcaaaaaaataaaggag
aggattcgtaatcacaaataccggagcctgggtgacctggagaaagatgtcatgcttctc
tgtcacaacgctcagacgttcaacttggagggatctcagatctatgaagactcgatcgtc
ttacagtctgtgtttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggac
gacagcaacgaggaggaggaggaggaagatgaagaggagtccgagtcagaggcaaaatcc
gtcaaggtgaaaatcaagctcaataaaaaagacgagaaaggccgggacaaaggcaaaggc
aagaaaaggccgaatcgaggaaaagccaagcccgtagtgagtgatttcgacagcgatgag
gagcaggaggaaaacgaacagtcagaagcaagcgggactgacgatgagtga
DBGET
integrated database retrieval system
