Herpailurus yagouaroundi (jaguarundi): 121013908
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Entry
121013908 CDS
T07555
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121013908 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121013908 (XAB2)
03041 Spliceosome [BR:
pyu03041
]
121013908 (XAB2)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121013908 (XAB2)
Spliceosome [BR:
pyu03041
]
Complex B
Other components
Prp19-related factors
121013908 (XAB2)
Complex C
121013908 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
121013908
NCBI-ProteinID:
XP_040305702
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGGDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcgcggccggagcggccggaccttgttttcgaggaagag
gacctcccctacgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagttcaagcagggtgccccgaagccgaggctcaatcagctgtacgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcgcgccgggca
caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacggctgtggctggactattgccagttcctg
atggaccagggccgaatcacacacacccgccgcactttcgaccgcgctctccgggcactg
cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacaccca
ctacctgagacggccgtgcggggctaccggcgcttcctcaagctgagccctgagagtgca
gaggagtacatcgagtacctcaagtccagtgaccggctggatgaagccgcacagcgcctg
gccaccgtggtgaacgacgagcgctttgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgcagcggccacttcgagaaggctcgagacgtgtacgag
gaggccatccggactgtgatgactgtgcgcgacttcacccaggtgttcgacagctacgcg
cagtttgaggagagcatgatcgcagccaagatggagacggcctcagaactggggcgggag
gaggaagatgacgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacagag
gccgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggtcgcg
tttgccaagttttacgaggataatgggcagctggacgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgtggc
gagctggagctccggcacgagaactacgaccaggctttgcggctgctgcggaaggccact
gcgctgcctgcccgccgagccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctgggcaccttc
cagtccaccaaggccgtctatgaccgcatcctggatctgcgtatcgccacgccccagatt
gtcatcaactacgccatgttcttggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaaattcattgcccgctacgggggccgcaagctggagcgggcgcgggacctcttc
gaacaggcgctggacggctgccctcccaaatacgcaaagacactgtacctgctgtacgcc
cagctggaggaagagtggggcctggcccggcacgccatggcagtgtacgagcgcgccacc
cgggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggggtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggcgag
atcgaccgggcgcgggccatctacagcttctgctcccagatctgtgacccccggaccacc
ggggctttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc
cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gatgcgtcccgggaggagctggctgagctggcccagcaagccaacccggaggagatcgag
ctaggcggggacgaggacgaggacgagatggatctggaacccaacgaggtgcggttggag
cagcagagtgtgccggctgccgtgttcgggagcctgaaggaggactga
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