Herpailurus yagouaroundi (jaguarundi): 121014479
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Entry
121014479 CDS
T07555
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04382
Cornified envelope formation
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04518
Integrin signaling
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05165
Human papillomavirus infection
pyu05200
Pathways in cancer
pyu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121014479 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121014479 (COL4A4)
04518 Integrin signaling
121014479 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121014479 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121014479 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121014479 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
121014479 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
121014479 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121014479 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
121014479 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
121014479 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
121014479 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121014479 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyu04147
]
121014479 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121014479 (COL4A4)
Exosome [BR:
pyu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121014479 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121014479 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121014479
NCBI-ProteinID:
XP_040306746
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MASIKCSFRWIKPLATDPWLLILILFSVQHIYASAKKFIGPCGGRDCSVCQCFPEKGSRG
QPGLPGPQGPIGPLGLPGPIGIPGEKGMRGDSGPPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKPGMHGYNGSRGDPGLPGERGVPGPRGPPGLPGENGEKGNSVFILGAIKGI
PGDRGDPGPPGLPGSRGARGPAGPMGHPGEPGLPGAPGHPGRPGLKGNPGVGVKGQMGEP
GEVGQQGSPGPTLLVQPPDSCLYKGEKGIKGMPGVTGPPGPPGPKGKPGFGAKGEKGVPG
FSGPRGDPGSYGLPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGYPGPPGVLVTPSLPL
KGPPGDPGRPGRYGETGSVGPPGPPGPSGPPGETCAGMMGPPGPGGFPGHPGFPGAAGIP
GRADSTPGKPGSPGPPGLPGAPGLQGPPGSDVIYCSVGHPGPQGIKGKAGPPGRRGSKGE
KGNAGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGHPGPPGAEGSPGPPGKPG
AAGPLGSKGEKGDMVVSRVKGQKGERGPDGLPGFPGQQGQHGQDGLPGERGDPGPPGDHE
DAAPGAKGFPGLPGPPGRTGPKGQPGLGFPGPPGERGPPGAPGRPGERGLEGLKGQKGDT
ISCNVTYPGRPGPPGFDGAPGPKGLPGPPGAPGLRCLDGPKGQRGKPGISEIPGPPGFRG
DVGDPGFGGAKGSSLPGPPGSPGSRGANGQKGIMGDTAYGHPGPPGERGLAGVPGSKGHR
GDPGPPGFAGPAGLPGFPGLKGPRGREGSAGFPGIPGLPGHSCERGAPGTPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLAGVPGRPGVDGPPGPPGLPGPIGDDGLPGLPGPK
GSQGLPGFPGFPGERGKPGLEGHPGRKGEPGERGRPGFLGDKGVKGAKGARGPPGDEGEM
AVISLKGKPGEPGPPGDSGFPGAEGDKGNPGMQGRRGEPGRYGPPGFHRGEPGRTGHPGL
PGAPGPPGSPGLRGIIGFPGFPGDQGEPGSPGSPGISGSDGLRGPKGNKGDPASQFGPPG
PEGEPGSPGCPGHLGAPGERGLPGVQGPRGPPGRPGLPGSSGPPGCPGDPGVPGLKGHPG
DMGDPGPRGMMGDPGTPGLPGIKGPSGSPGLNGLHGLKGQKGAKGASGSHEVGPPGPMGI
PGPKGETGDPGSPGISPPGLPGEKGPPGPPGRPGSPGPAGATGRAPEGDIPDPGPPGDQG
PPGPDGPRGAPGPPGPPGSVDLPKGEPGDRGLPGPPGPPGPPGPPGRKGFPGCDGKDGQK
GPIGFPGLQGPPGLPGSPGEKGLPGFPGRQGPPGPPGARGEPGPPADVDSCPRIPGLPGV
PGPRGPEGGMGPPGMRGPPGAGCKGESGPDGRRGEDGLPGSPGPPGSKGDTGEAGCPGAP
GPPGPIGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKAHN
QDLGLPGSCLPMFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPMMPLSEEEIRPYIS
RCAVCEAPAQVVALHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSVPSPDTFKESQAQRQRISRCQ
VCMKYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaataaagtgctcattcaggtggatcaagccattggccacagatccctggttg
cttatacttatcctgttttctgtacaacacatatatgcgagtgcaaagaagtttattggg
ccttgcggaggaagagattgctcagtttgccagtgctttcctgaaaaagggtctcggggt
caaccaggactcccagggccacagggtcctattggacccctgggactgccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagcggccctcctggagcagccggtgac
aaaggtgataagggtccaactggtgttcctggatttccaggtttggatggcatacctggg
cacccggggcctcctggatccagaggcaagcctggaatgcatgggtacaatggctcgaga
ggtgatccagggcttccaggagaaagaggagttcctggcccaagaggccccccaggcctt
cctggggaaaatggagaaaaaggaaattctgtgttcattttaggtgccattaaaggaatt
ccgggtgacagaggggacccaggacctcctggcttgccgggatctaggggtgcaagagga
ccagcgggcccaatgggacatccaggagagcctgggttaccaggtgctccgggccatcct
gggagaccaggcttgaagggtaatcctggtgtgggagtgaaggggcaaatgggagaaccg
ggtgaagttggccagcaaggttctcctggacccaccttattggtacagccacctgattct
tgtctgtataaaggagaaaagggcataaaaggaatgcctggtgtaactggacctccagga
ccaccaggacccaagggaaaacctggatttggggccaaaggagagaagggtgttcctggg
ttctcaggaccgcggggtgatcctggttcctatgggttgccaggctttccaggattaaag
ggggaaccaggactgtttggagatcctggatcatttggatttcttggcccaaagggggac
cctggagatcgcgggtacccaggaccaccgggtgttttggtaactccatctcttccgctc
aaaggccctccaggggatccggggcgccctggccgctatggagaaacggggtctgttgga
ccgcctggtccccctggtccctcaggaccaccaggggaaacctgtgcaggcatgatggga
ccccctgggccaggagggtttcctggtcatccgggatttccaggggcagccggtatcccc
gggagagctgattccactccagggaaaccagggagcccgggaccacctgggttgcctgga
gctccaggactgcagggccctccaggatcagatgttatatattgtagtgtcgggcaccct
ggaccacaaggaataaaaggcaaagcaggtcctccaggaagaagaggctcgaaaggagaa
aaaggaaacgcggggctctgtgcctgtgagcctggtcccatgggcccaccaggccctcca
ggacttcctgggaggcagggtagtaagggagacttggggctccctgggtggcttggagag
aaaggtcatccaggccctccgggtgctgaaggatctccaggaccaccaggaaaacccggt
gctgcaggaccacttggcagtaaaggagaaaagggagacatggttgtgtcaagagtgaaa
gggcagaaaggagaaaggggtcctgatgggctcccaggatttccagggcaacagggacaa
catggccaggatggacttcctggagaaaggggggatccgggacccccgggggatcatgaa
gacgcagccccaggtgcaaaagggtttcctggattgccagggcccccaggaagaacagga
cctaagggacaaccaggactaggatttcccgggccaccaggagaaagagggccaccagga
gctccaggccgtcctggcgagaggggccttgagggcctgaagggtcagaaaggtgataca
atttcttgtaatgtaacctaccctgggaggccagggcctccaggttttgatggagctcca
ggaccaaagggacttccgggccctccgggcgctccagggttgaggtgtttagatgggcca
aagggtcagcgtggcaaaccaggaatatcagaaatacctggtccacctggttttcgtggt
gacgtaggagatccaggttttggaggtgcaaaggggtcctcccttcctgggcccccaggc
tctcccggttctcgtggagcaaatgggcagaaaggaatcatgggagacactgcctacggc
cacccaggtcccccgggagagagaggtcttgcaggggtgccggggtcaaaaggacacaga
ggtgatccaggacctccaggctttgcagggccggctggtttgccaggattcccaggtctc
aaaggccccagaggcagagagggaagtgctgggtttccagggatcccaggtctacctggc
cattcctgtgaaagaggcgccccaggaacaccagggcaacccggactccccggggctccg
ggcagtccaggtgccccaggttggaaaggacagcgaggggatgtggggcctcctggtccg
gctggaatgaagggtctcgctggagtcccaggacggccaggggtagatggaccccccgga
cccccagggctcccaggccccataggcgatgatggactgcctggtcttccaggcccaaag
ggatcccaggggctgcctggcttcccaggttttccaggggagagaggaaagcctggcctg
gaggggcaccctggccgtaaaggggaaccaggagagaggggtcggcctggcttcctcgga
gacaagggggtgaaaggcgccaaaggagcaaggggacccccaggagatgaaggagagatg
gctgtaatttccctaaaggggaaacccggggaacctggacctcctggagatagtgggttc
ccaggagcagaaggtgataaaggcaatccggggatgcaggggaggagaggagagccggga
agatacggaccacctggatttcacagaggggagcctggtagaactgggcacccggggctc
cctggagccccaggccctccaggctcacccgggctgagaggcattattggttttccagga
tttccaggtgaccagggtgaaccaggttctccagggtcccctggaatttcaggaagcgat
ggactgagaggccctaaaggaaacaaaggggaccctgctagtcagtttggcccacctggt
cccgagggagaaccaggtagccctggatgtccaggacatcttggagcacctggagagcgg
ggcttgccgggtgttcaagggcccagaggaccacctggaaggccaggactacctggctcc
tccggaccaccaggctgtccaggtgatccaggagtacctgggctgaagggacatccagga
gacatgggggatcctgggccaagaggcatgatgggggacccggggacaccaggtcttccg
ggaataaaaggtccctccgggtcgcccggtctgaacggcttacatggtttaaagggtcag
aaaggagccaaaggcgcttcaggctcgcatgaagtgggcccacctggcccaatgggcata
cctgggccgaaaggggagacaggagaccccgggagcccaggaatttctcccccaggcctt
cctggagaaaaaggtccccccggtcccccagggagacctggatcacctggtcccgcaggt
gccacaggaagagctcctgaaggtgacattcctgacccaggtccccccggcgatcaggga
cctcccggccccgatggtccaagaggagcacccgggcccccgggcccccctgggagtgtt
gaccttccgaaaggggaaccaggagaccggggtctgccgggtcccccgggccccccgggc
cccccaggccctccaggacgcaaaggcttcccgggatgtgatggaaaagatggccagaaa
ggaccaattggattcccgggactgcaggggccacctggacttccgggatctcctggggag
aagggtttacctggctttccaggcagacaagggccccctgggcctccaggtgccagaggt
gaaccggggccacctgcagacgtggattcctgtccccgaatccccgggcttcctggggtg
ccaggcccaagaggaccagaaggaggcatggggccccccggaatgagaggccccccagga
gcagggtgcaaaggagagtcggggccggatggcaggaggggcgaggatggcctcccaggg
tctcctgggcctcctggaagcaaaggggacacgggagaagcgggctgtcccggagcacca
ggccctcctgggcccattggggatcccgggcccaaagggtttgggcctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgcccagcgggcatg
cccaggctgtggacgggctacagtctgttgtacctggaaggacaggagaaggctcacaac
caagacctgggtctgccggggtcttgccttcccatgtttagcacactgccctttgcctac
tgtaacatccaccaagtctgccactacgcccggagaaacgaccgatcgtactggctggcc
agcgccgcgcccctgcccatgatgccgctctcggaagaagagatccgcccgtacatcagc
cgctgtgccgtgtgcgaggccccggctcaggtggtggctctgcacagccaggaccagtcc
atccctccgtgtccacagacctggaggagcctctggatcgggtactcgttcctgatgcac
acaggggctggggaccaaggaggagggcaggccctcatgtccccgggcagctgcctggaa
gattttcgagcagcgccgttcctcgaatgccaaggccgccagggaacttgccactttttt
gcaaacgagtatagcttctggctgacaacagtgaggcctgacctgcaattttcctcggtg
ccatcaccagacaccttcaaagaaagccaggcccagcggcagagaatcagcagatgccag
gtctgcatgaaatacagctag
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