Puma yagouaroundi (jaguarundi): 121015300
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Entry
121015300 CDS
T07555
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pyu
Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121015300 (HELZ)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
121015300 (HELZ)
3'-5' decay
Other 3'-5' decay factors
121015300 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
121015300
NCBI-ProteinID:
XP_040308090
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLATGDGAFQAVLCCMQLKGKLQPVSSILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEGLEGGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLCRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALAAKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNTNKLQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRILTHQAAMAYNMNLLQTHGRGSPLPYGLGHHPPV
SIGQPQSQHQEKDQHEPSRNGKSDTNNPGPEISKIRTPEKKPMESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQPNQLPPQPNQVVPPQNPLNQLTQQPPPQLSPAYQAGPNSAFFNSAVSHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPLLPSHLNNFTDETPPGLPIGEALDRM
HGSVALETLRQQQVRLQQWNEHHAYLSQGSIPYPHHHPHPHLQHLPQPPVRADWKLPSSA
EDEAETADSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAAPPPPSST
DHSGHFSNFNDSSRDIEVTNNPAFPQRLPPQLFSSPFSLPSEHLAPPPLKYLAPDGAWTF
ANLQQSHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSL
EEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQYKELQDHSSQSSFNFSSPESWV
NTTSSTPYQNIPCNGPSRTAQPRELIVPPPKTVKPPEDQLKSESLEVSSSFNYNVLQHLG
QFPPLMPNKQIAESASSSSQQSSGGSKPAMSYASALRAPPKPRPQPEQAKKSSDPLSLFQ
ELSLGSSSGSNGFYSYFK
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgcgaatcacttaagaggcag
gactatgaaatgaccctcaagcactgcacagaggccctcctttctctcggccagtactcc
atggccgacttcacagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttacagaatcgcctcgtttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggggaaggcctggccacgggagatggtgccttccaggcagtgctttgc
tgcatgcagctgaaaggaaagctccagcctgtatccagcattcttgccaagtcgctgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactgaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctgtctggatatcacgtggaaggcttggaaggg
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagaacaaggcatctgtaggtacggtgcccagtgtact
tcagcgcactcccaggaagaactagcagaatggcagaaacgatacgcctcgcggctgata
aaattgaaacagcaaaacgagaataaacagctctcaggcagttacatggagaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagcgaatgtatagagggagta
aaagttgagcataatcctgatctgtcggttactgtcaacaccaaaaagtctcaccagaca
tggacctttgctcttacttgtaagcctgcaagaatgctgtgtcgggtagcgttgctctat
gatgcacatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcgcaggaagtcccagagaactgtcaagaatggataggagggaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatctttggaact
tttcgccaaaccatagttttcgactttggattggaaccggtactcatgcaaagagtaatg
attgatgcggcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtcggttttagacaaatcattgaccaagaccaactatcagtcacggctg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcaaattctagcaagcttcatgcttacgggagtttctggaggcgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gagaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcactagacaggatcaaggacaatggggttttgtttccagacatc
actatgactccaaccataccttggagtcccaacagacagtgggacgaacaattggatcct
cggctgaatgcaaaacagaaagaggctgttctggccatcacaactcctctttcaatccag
ctgcctcccgtcctcatcatcgggccctatgggacaggcaaaacgttcactctagctcag
gccgtcaagcacatactccagcagcaggagacgagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggttaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctgttagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcgttagcagctaaaaatacgcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtgtcattacttgatcgactctatgagcattaccctgccgagtttccgtgtagg
atcctcctgtgtgagaattaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaactgatggccagtggaaagcaaccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtcttcgaagtggtggaacgtgtggaagagttgagacggaagtggccg
gtagcatgggggaagttggatgatggcagtattggcgtggtgactccgtacgctgatcaa
gtgtttaggatacgtgctgaacttcggaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcagttcagagttttgtttcttagcacagtacgtacaagg
catacttgtaaacacaaacagacaccaattaaaaagaaagagcaactgctggaagattcc
acagaggatttagattatggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatctctggttgctgtggtgggtgatcccatcgccctgtgctctatcggaaga
tgcaggaaattttgggagcggtttattgccctgtgtcatgaaaataatagcctacacgga
atcacttttgaacagatcaaagctcagctagaggctttagaactaaagaagacatatgtg
ttgaatccgctggcacctgaatttatcccccgggctctaagactgcagcattcaggaaat
accaacaaactgcagcagtcaccccccaaggggaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatatactcctccacccccccttggacctcacccaaatttggggaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacagggtaccagggcagg
ttcgcagttgatcctcggatccttacacaccaagcagcgatggcctacaatatgaacctc
ttacagacacacggacgggggtctcccctaccgtatggccttgggcaccacccacccgtc
agcatagggcagccacaaagccagcatcaggagaaggatcaacatgagccaagtcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattagtaagattcgaacaccagagaaa
aagcctatggaatccaaacagattgatttggaatcaaatccacagaacagaagtcctgag
tcgcgtcctggtgttgtttatcccaataccaaatttcatcgcaaagataatctcaacccg
agacatataaatcttcctctccctgctccccacgcacagtatgcaatccccaatcgtcat
tttcatccccttccccagctaccaagaccaccatttccaattccgcagcagcacaccttg
ttaaatcagcagcagaataatttgcctgaacaaccaaatcagttgccgccccaaccgaat
caggtagtcccgccacagaatccgttgaatcagctgactcagcagccacctcctcaactt
tcccctgcctatcaggcagggcccaacagcgctttctttaatagtgcggtctctcaccgg
ccccagtcccctcctgcagaggctgtgattcctgagcagcagccccctcccatgctgcag
gaaggccacagccctcttcgggccatcgcacagcccggccccctccttccttcccatctg
aataacttcactgatgagactcccccgggattgccaatcggggaggctttagatcgtatg
catgggagtgtagctctggaaacactgaggcagcagcaggtgcggctccagcagtggaat
gagcatcacgcctatctcagtcagggcagtattccgtaccctcaccaccatcctcatcct
cacctccagcatcttcctcagccgccagtgagagcggactggaagctccccagcagcgcg
gaggacgaagcagaaaccgcagactccaggtttcaagacttaatcagagaactgtctaat
cgtgatcaaagtgaaacacgggaactggctgaaatgccaccacctcaatcaagacttttg
caatatagacaagttcagagcaggagcccgccagcagccccgcctcccccgtccagcacg
gaccacagtggccacttttctaactttaatgacagtagcagagacatcgaagtaaccaac
aacccagcatttccgcagcgcctgccgccccagctcttcagctcaccgttctcattgcca
tccgaacaccttgcccctcctcccttgaaatacctggcgcctgacggagcgtggactttt
gctaacttacaacagagtcacctaatggggccgggttttccctacggcctgcctcccttg
cctcacagaccaccgcagaacccttttgtacaaatacagaatcatcaacacgctattggt
caagagccatttcacccactgtcatctcgaacagtatcttcttcttcgctccctagctta
gaagagtatgaacccagaggacctggtcggcccttgtaccaaagaagaatctcctctagc
tcagtccagccttgttctgaagaagtaagcactcctcaagacagtcttgctcagtataaa
gagcttcaggaccatagtagccaatcttctttcaacttttcatccccggagtcctgggta
aacaccacctcatctaccccctatcagaacattccgtgtaatggacccagcaggacagct
caacccagagagttgatagttccaccacccaagaccgtcaaaccccctgaggatcagctg
aagtccgagagcctcgaggtgtccagttccttcaactataatgtgctgcagcatctcggc
cagttccccccactcatgcccaacaagcagatcgcggagtcggccagcagcagtagccag
cagagctcggggggcagcaagcccgccatgtcctacgccagcgctttgcgggcccctccc
aagcccaggccccagcctgagcaggccaagaagagtagcgaccctctgtctctgttccag
gaactcagcctggggagctcatcaggcagcaatggcttttactcctattttaaataa
DBGET
integrated database retrieval system
