Herpailurus yagouaroundi (jaguarundi): 121016312
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Entry
121016312 CDS
T07555
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu01524
Platinum drug resistance
pyu03430
Mismatch repair
pyu05200
Pathways in cancer
pyu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121016312 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121016312 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
121016312 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
121016312 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyu03400
]
121016312 (MSH6)
DNA repair and recombination proteins [BR:
pyu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121016312 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
121016312
NCBI-ProteinID:
XP_040309740
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEPGPLAG
SASPPEARNINGGLRKSAAPAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNEDSGVMLPQVLKG
MTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATR
PGAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVADNFKSKILKQVITLQTKNPEGR
FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR
IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILF
PEEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEESGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKA
REFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggcggggatgcggcctggagcgaggccgagcctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacatcaatggagggctgcggaagtcggccgcgccc
gctgtcccccccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccgccagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
attggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagatgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactctgagaactctccttgaagaagca
tattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaaggt
atgacctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctc
tctgctctaggtggttgtgtcttctacctcaaaaaatgccttatcgatcaagagctttta
tcaatggctaattttgaagaatacattcccttggattctgacagggttagtgctacaaga
cctggtgctgtttttgcaaaagccaatcaacgaatggtgctagatgctgtgacattaagc
aacttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaag
attgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgcccca
ctctgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtg
cctgacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctg
ctgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgctgacaac
tttaagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgt
tttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggct
cgaaggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcga
attggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaatt
ccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaag
ggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgct
gaagagcggagagacgtatcattgaaagactgcatgcggcgactcttctataactttgat
aaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtcttactg
tgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgttt
ccagaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgcattacg
aagactttttttggagatgactttattcctaatgacattctaataggctgtgaggaagag
gaggaggaaagtggcaaagcttattgtgtgcttgttactggacctaatatggggggcaag
tcgacactcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacata
cctgctgaagtatgcaggctcacacctattgatagagtatttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatc
cttacacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaag
tgtcgtacattgttttctacccattaccattcattagtggaagattattctcaaaacgtt
gcagtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctatataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagca
agagaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaatta
tag
DBGET
integrated database retrieval system
