KEGG   Herpailurus yagouaroundi (jaguarundi): 121017591
Entry
121017591         CDS       T07555                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pyu  Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03015  mRNA surveillance pathway
pyu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pyu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121017591 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    121017591 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pyu03021]
    121017591 (CPSF4)
   03019 Messenger RNA biogenesis [BR:pyu03019]
    121017591 (CPSF4)
Transcription machinery [BR:pyu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     121017591 (CPSF4)
Messenger RNA biogenesis [BR:pyu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     121017591 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 121017591
NCBI-ProteinID: XP_040311845
LinkDB
Position
Unknown
AA seq 269 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgcagtggag
cagcagctcggggcacagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccattccgccatatc
agtggcgagaagacggttgtgtgtaaacactggctgcgggggctgtgcaagaagggggac
cagtgcgagttcctgcacgagtacgacatgaccaagatgcctgagtgctacttctactcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccctgagtccaag
atcaaggactgcccttggtacgaccgtggcttctgcaagcatggtcccctgtgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccagaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccgatgggaaccaccgagcagccccca
ctgccacagcagacgcagcctccgacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagagccccgcag
gtcatcggggtcatgcagagtcaaaacagcagcgcaggcaaccggggaccccggccactg
gagcaggtcacctgttacaagtgtggcgagaaaggacactacgccaacagatgcaccaaa
ggccacttggcctttctcagtggacagtga

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