Puma yagouaroundi (jaguarundi): 121019763
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Entry
121019763 CDS
T07555
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pyu
Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pyu03036
]
121019763 (CHD5)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121019763 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
121019763
NCBI-ProteinID:
XP_040315451
LinkDB
All DBs
Position
Unknown
AA seq
1931 aa
AA seq
DB search
MLLRLAPSSKEEDGLGGFDDCFPEEPVGLPKKKKSKKLKENRSKGKRKKKEGSNDELTEN
EEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDEDDNEDGCLKEPKSSGQLM
AEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSAN
NPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIRKAKTKEGKGPGVRKKIKA
SKDSKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSSSVRSEGSAA
LGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAP
EGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY
HLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVP
PPKPLEGIPEREFFVKWAGLSYWHCSWVKELQQLELYHTVMYRNYQRKNDMDEPPPFDYG
SGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDL
PYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKPKEDKQKPPDTP
IVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF
LYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFE
DNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSK
FFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIK
KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN
QVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRD
EGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL
STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI
TQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTP
IPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTEL
QNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRR
QLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRG
KSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFE
HVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDE
KELGVQKPKKPPEIQALPTALDRVEGEDKHENSDGQERLEDAEKAPLSPEQPPKEEVLPE
KEKILDKLELSLIHSRGDGNDFRPDDTKVEEKEPIETQQNGDKEEDEEGKKEDKNGKFKF
MFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDP
RYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAM
ALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLS
RIPPVAARLQMSERSILSRLTNRAGDPTTQQGAFGNSQMYSNNFGPNFRGPGPGGIVNYN
QMPLGPYVTDI
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgagacttgcaccttcatctaaagaagaagatggtcttgggggcttcgatgac
tgcttccctgaggagcctgtgggccttcccaagaagaagaaatccaagaagctcaaggag
aacaggtccaaagggaaacggaagaagaaggaggggagcaatgacgagctgacggaaaat
gaagaagatctggaagagaagtcggagagtgagggcagtgactactcccctaataagaag
aagaaaaagaaactcaaggacaagaaggagaaaaaagccaagcgaaagaggaaagacgac
gacgaggatgataacgaggacgggtgcctgaaggagcccaagtcctcggggcagctcatg
gccgagtggggcctggacgatgtggagtacctgttctcagaggccgactaccacacactg
accaactacaaggccttcagtcagttcctcaggccgctcattgccaagaagaacccgaag
atccccatgtccaaaatgatgaccgtcctgggtgccaagtggcgggaattcagcgccaac
aaccctttcaagggcagctcggcagcggctgccgcggcagcagtggccgcggccgtggag
acagtcaccatcgcccctccgctggctgtcagcccccagcaggcaccccagcctgtacct
atccgcaaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagcc
tccaaggactcgaagaaaaagggcaaagggagaaaggtagccgggctcaagttccgcttt
ggagggatcagcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggag
tcggacttcgacagcgccagcatccacagctcctccgtgcgctccgagggctcggcagcc
ctggggaagaaaagcaagaggcggcgcaagaagaggaggattgacgatggtgatggctat
gagacggaccaccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgc
gacacctgcccgcgggcctaccacctagtctgcctcgacccagagctggagaaggctccg
gagggcaagtggagctgtcctcactgtgaaaaggaggggatccagtgggagccgaaggac
gacgaggacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttc
tgccgcgtgtgcaaagacggcggcgaactgctctgctgcgacgcctgcccgtcctcctac
cacctgcattgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccg
cgctgtacttgtcccccactgaagggcaaagtccagcggatcctgcactggaggtggacg
gagcccccggctcccttcatggtggggctgccggggcccgacgtggagcccggtgtcccc
ccaccgaagcccctggagggcattccggagagggagttctttgtcaagtgggctggactc
tcctactggcactgctcctgggtgaaagagttacagcagctggagctgtaccacacggtg
atgtatcgcaactaccaaagaaagaacgacatggatgagccgccgccctttgactacggc
tctggcgacgaggacggcaaaagcgagaagaggaagaacaaggaccctctctatgccaag
atggaggagcgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgtatc
ctgaaccacagcttcgacaaaaagggggacgtgcactacctgatcaagtggaaagacctg
ccctatgaccagtgcacctgggagatcgacgacatcgacatcccctactacgacaacctg
aagcaggcctactggggtcacagggagctgatgctgggtgaggatgccaggctgcccaag
aggctggtcaagaagggcaagaagccaaaggaggataaacagaagccgccagacacaccc
atcgtggatcccacggtcaagtttgacaagcagccttggtacattgactccacgggtggc
acactgcacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggc
acagacaccatcctggccgacgagatgggcctgggcaagactgtgcagaccatcgtcttc
ctctactccctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctg
tccaccatcatcaactgggagcgggagtttgagatgtgggcgcccgacttctacgtggtc
acctacacgggggacaaggagagccgctccgtgatccgggagaatgagttttctttcgag
gacaacgccattcggagtggaaagaaggtgttccgcatgaagaaagaagtgcagatcaaa
ttccacgtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctcc
atcgagtgggcctgccttgtggtggacgaggcccaccggctcaagaacaaccagtccaag
ttcttcagggtcttgaacagctacaagatcgattacaagctgctgctgacggggaccccg
cttcagaacaacctggaggagcttttccacctcctcaacttcctgactccagagaggttc
aacaatctggaaggcttcctggaggagtttgccgatatctccaaggaagaccagatcaaa
aagctccatgacctgctggggccgcacatgctgaggcggctcaaggccgatgtgttcaag
aacatgccggccaagaccgagctgatcgttcgcgtggagctgagccagatgcagaagaag
tactacaagttcatcctcacgcggaacttcgaggcactgaactccaaggggggcgggaac
caggtgtcgctgctcaacatcatgatggacctgaagaagtgttgcaaccacccctacctc
ttccccgtggctgccgtggaggcccccgtcttgcccaatggctcctatgacggcagctcc
ctggtcaagtcctcgggcaagctcatgctgctacagaagatgctcaagaaactgagggat
gaagggcaccgcgtgctcattttctcccagatgacgaagatgttggaccttctggaggac
ttcctggagtatgagggctacaagtatgagcggattgatggtggcatcactgggggcctc
cgacaagaggcgatcgacagattcaacgcccccggggcccagcagttctgcttcctcctc
tcgacccgggcgggtggcctgggcatcaacctggctacagcagacacggtcatcatctac
gactcggactggaatccacacaatgacatccaggccttcagccgcgcccaccgcatcgga
cagaacaagaaggtaatgatctaccgctttgtgactcgggcctcggtggaggagcgcatc
acgcaggtggccaagcgcaagatgatgctcacccacctggtggtgcggcctggcctcggt
tccaagtctggctccatgaccaagcaggagctggacgacattctcaagttcggcaccgag
gagctcttcaaggacgacgtggagggcatgatgtctcagggccagaggcctgtcacgccc
atcccggatgtccagtcctctaaagggggagccctggctgccagcgccaagaaaaagcat
ggcagtaccccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgac
gatgcggccatctccaagctgctggacagaaaccaggacgccacggacgacacggagctg
cagaatatgaacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggag
gatggcgtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgac
tactgggagaagctgcttcggcaccactacgagcagcagcaggaggacctggcccgcaat
ctgggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggac
caggagtggcaggacgagctctcggataaccagtccgaatattccatcggctccgaggac
gaggacgaggactttgaggaaaggccagaagggcagagtggacggcgacaatccaggagg
cagctgaaaagcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaat
atcgaggtgctgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgc
tggggcatgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgaggg
aagagcgagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccg
ggggcggacggtgcagagaccttcgcggacggcgtgccccgtgagggcctctcaaggcag
cacgtgcttacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgaa
cacgttaacgggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaag
ccaagcgaagtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctc
ctgccggccccactgggcctgccagacaaaatggaagcccagctgggctacatggatgag
aaggagctgggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgcc
ctggacagagtggagggcgaggacaagcatgagaactcagatggccaggagcgactggag
gacgcagagaaggccccgctgtccccagagcagccgccaaaagaagaagtgcttcctgag
aaggagaaaattctggacaagctggagctaagcttgattcacagcagaggtgatggcaac
gatttcaggccagatgacaccaaagtggaggagaaggagcccattgaaacacagcaaaat
ggtgacaaagaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattc
atgttcaacattgcagatgggggcttcacagagctgcacacgttgtggcagaatgaggaa
cgtgctgccgtgtcctcggggaaaatctacgacatctggcaccggcgtcatgactactgg
ctgctggcgggcatcgtgacgcacggctacgcccgctggcaggacatccagaatgacccg
aggtacatgatcctcaacgagcccttcaagtctgagatccacaagggcaactatctggag
atgaagaacaagttcctggcccgcaggttcaagctgctggagcaggccctggtcatcgag
gagcagctccggagggccgcgtaccttaacatgacccaggaccccaaccacccagccatg
gccctcaacgcccgcctggccgaggtggagtgccttgctgagagccaccagcacctgtcc
aaggagtcccttgccgggaacaagccagccaatgctgtcctgcacaaggtcctgaaccag
ctggaggagctgctgagtgatatgaaggcggacgtgacgcgcctgccctccatgctgtcg
cgcatcccccccgtggctgcccgtctccagatgtcagagcgcagcatcctgagccgcctg
accaaccgagctggtgaccccaccactcagcagggcgctttcggcaactcccagatgtac
agcaacaactttgggcccaacttccggggccctggaccgggagggattgtcaactacaac
cagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
