KEGG   Puma yagouaroundi (jaguarundi): 121023077
Entry
121023077         CDS       T07555                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pyu  Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:pyu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyu03400]
    121023077 (MDC1)
DNA repair and recombination proteins [BR:pyu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121023077 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 121023077
NCBI-ProteinID: XP_040320682
LinkDB
Position
Unknown
AA seq 1925 aa
MVMEDTQAINWEVEEEEEKEIPSESLGCSLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGR
MPDCSVILPFSSISKQHAVIEILAWDKAPVLQDCGSLNGTQVLRPPKVLSPGVSHRLRDQ
ELILFADLPCQYHRLNVPLPFVSRGPLTIEETPRVQGRTQPQGLLLAEDSEEEVDSPSER
CVVKEPRTCPLAAVVPESDEEGPSPAPDGPGPPFAFNLDSDTDEEESQHPASGEASSTAR
RGSTAETKQSTAMATEIQLEKNQCSVKERNNDTEVERDARNGVVPLGVILERNQPAGEDS
DTDVDDESRPPGKPAVVHLERAQPSDFIDSDTDVEEEEIPATPAVVPMKKRQIFHGISTE
SPRTHALVHLQESPTGSDTDVGQGEIQLAVPLERSRASVVIDSNTDGEEEVLAALALAHL
KESRATTWNRDTDLEEDRAQPVALLEQNQTSTGRDSDTDMEEEGLPMEKRGTVFKGHTDK
AYSEKRQPPPQNSDLGVDKDKSSLGVHLERSQASATVDINIQVKEKVPPGSAVILVEKHQ
VPLVWTDQTDVEVEEGQAKLPVMHLEEAKPPSGDCETDVEGISLAASVVADTRKSQLPAE
EDAGAKRAVAVLEHKRDLEARAQGGSLVSQVEQDHLPVSREDINDLVVTGTSGESIQPQR
EGAQTSIEREREPHMDRTQDSGDNHGDSEDLDLQATQCFVERDNQNLEAQSMEDEATQAF
LVTLPQEPGPSCCSFQDTGTLDEPWEVLATQPFCPRESEAPEPEPIVAPLDAHGSCLSTP
WTIPQGQNPGSPVHIEPLGIQDKGMQTMEKDMGIPREAAEGVAPERGPLDRETENLPSGE
QEDVIGEEELTRGIQVLARDTQGQESDQKVKIASIKRNMESLNVEIEITREIQEKEIEKQ
ILAREISERETEKLVLEREGEPNGLGVEVPEVILERGPQRGETEKGSQDQEGQASSPTLE
LETGTGSHQGLASASVASGSQSGGGEGVPMSPRRQQRGHLTCEVPPAEKAFGGDQESTDA
CQPPAVPGASAPHQNPLLFQSQKHPVPQPFCSSSPSSLKPIPRTRQNRNQKVPETPLPKP
KVRLRGSSRKTPSPVSSVALEPHTAIPTDQPLSAEPTSQVTRGRRRRSSVKTPELVVPTA
PELQPSISKDQPITPELTSRITRGRTQRFSVKAPEVVVPTAPDVQPSTSKDQSVTPELIS
QDRTHKFVKTPEPVISTASQLQPSTSKGQFVLTESVSGATQGRARRSCVKTPKAIVPTAP
ELQPSTSKDQPVTPEPTSRVTRGRTRGSSVKIPPESTVPTAPELQPTTSKDQSVLTEPTS
GATHSRIPRSSVKIPELVVPTAPEVQSSIPTDQSVTPKPTSQRRTSRSFVKTHEPTVPTA
PELQPTTPKGQSVTPKRKSQCRTPRSSSKTPKPVVPTVPELQASTPTDEPVTPKLTPRAT
RGRTQRSSVKTPEPVVPTASELQPSISTDQPVTPEPTFRATRGRIHRSSVKIPQPIESTA
SDLESLNPIDQLVTPKAIAEGGQGKTLRSTVSAVPVLTTHESQNPDLIGQPVPPEPIPQA
NCSRKRRATRKHGSFTAPIVHQPHSAPPEPNSRSSKNQRRAVRAVESLRTIPEPALAQLP
EAPTHATQIQKVEAAGRSEFTPEPQSKPSQSRKRPLATVDSPPLQKRLQQKTVSLHKEEE
DSAESPRKDEVAVIPGPGKRKRDQTEEEPRGIPSCSLRRVKPNQESTAPKVLFTGVVDAR
GERAVLALGGSLASSVAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLP
PDEYVVTDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGT
VLPSMPRSYKPQRVVITCSQDFSRCSIPFRVGLPILSPEFLLTGVLKQEAKPEAFILSTL
EMSSS
NT seq 5778 nt   +upstreamnt  +downstreamnt
atggtcatggaagacacccaagctattaactgggaggttgaggaagaggaggagaaagag
atacccagtgaatccttggggtgtagcttggagcccgtaggacgactgcatatcttcagt
agtgcccatggaccagaaaaagatttccctctgtatctcgggaagaatatggtaggccga
atgcctgattgctctgtgatcctgcccttttcatccatctccaaacaacatgcagtgatt
gaaatcttggcctgggacaaggcacctgttcttcaagattgtggcagcctcaatggtact
caagtcctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctgagagaccag
gagttgattctctttgctgacttgccctgccagtaccatcgcctgaatgttcccctgccc
tttgtttcccggggccctctaactatagaagagacacccagggtacagggacgaactcaa
ccccagggactcctgttggctgaggactcagaggaggaagtagattctccttcagaaagg
tgtgtggtgaaagaaccaagaacctgccctctagctgcagtggttccagagagtgatgaa
gaggggccttcccctgccccagatggccctgggccaccttttgcattcaacctggacagt
gacacagatgaggaagaaagtcaacatccagcatcaggagaggcctcctcaactgccaga
agaggctccactgcagagacaaaacagtctacagctatggcaactgaaatccagcttgaa
aagaatcagtgttcagtaaaagagagaaacaatgacacagaagttgaaagggatgcaagg
aatggggtggtcccacttggggtgatactggagaggaaccaacctgctggggaagacagt
gacacagatgtggatgatgagagcaggcctccaggaaagcctgctgtggtccatttggaa
agggctcagccttctgacttcatagacagtgatactgatgtggaagaagaagagatccct
gcaaccccagctgtagttcctatgaagaagaggcaaatcttccatggaattagtacagag
agtcctcggacacatgccttggtacatctacaggagagcccaactggtagtgatacagat
gtggggcaaggtgagatccagctggcagtccctctagagagaagccgagcctctgtggtg
attgacagcaatacagatggtgaggaagaagtcttagcagcacttgctttggcacatctg
aaagagagccgagccactacatggaacagagatacagatttggaagaggacagggcccaa
cctgtggcccttctggagcaaaaccaaacctctactgggagagacagcgacacagacatg
gaggaggagggtctcccaatggaaaagagaggaactgttttcaagggtcacacagacaag
gcatattcagaaaagaggcaacctcctccccaaaacagtgatctaggggtggacaaagat
aagagctcacttggggtccatctggagagaagccaagcctctgccacagtggacatcaac
atacaagtgaaggagaaagtcccaccagggtcagctgttatacttgtggagaagcatcag
gtgcctctggtatggacagatcaaacagatgtggaagtagaagagggccaagcaaagctg
cctgtgatgcatctagaggaagccaaacctccatctggggactgtgagacagatgtggag
ggcatatccttagcagcttcagtggtggcagatacaagaaagagccagcttccagcagaa
gaggatgctggggcaaagagggctgtagctgttcttgagcacaagagagatcttgaggcg
agggcccagggtgggtcacttgtttcacaggtggagcaggatcacctccctgtctcaagg
gaggatattaatgatctggtggtcacaggcacttcaggggaatccatccagccacagaga
gagggagcccagacctccatagaaagggagagagaaccacatatggacaggacccaggac
tctggagacaaccacggtgattctgaagacctggacctacaggctacccagtgctttgtg
gagagagacaatcagaatctggaagcccagagcatggaggatgaagccacccaggcgttt
ctggttactctaccccaagagcctggtccttcctgctgtagcttccaggatacaggtacc
ttggatgagccgtgggaggtcttggcaacacagccattctgtccgagagagtctgaggcc
cctgagcccgagcccattgttgctcctcttgatgcccatggatcctgcctctctacacct
tggacaataccacaaggccaaaatccaggaagcccagttcacatagagccattgggaatt
caggacaaagggatgcagactatggaaaaagacatggggataccaagagaagcagcagag
ggggtggcccctgagagaggaccattggacagggaaactgagaacctgccatcaggagaa
caagaagatgtgataggagaagaagagttaaccagagggatacaggtgttagctagagat
actcaaggacaagagtctgaccaaaaggtgaaaattgcaagcattaaaagaaatatggag
agtttgaacgtagaaattgagataaccagggaaatacaagagaaagaaatagaaaagcag
attcttgcaagagaaatatctgagagagaaacagagaaactagtactagagagagagggt
gagccaaatggattaggagttgaggtaccagaagtaatactggagagaggcccacagaga
ggggagactgagaaagggagccaggaccaggaagggcaagcctccagtccaacactagag
cttgaaacagggacaggcagtcatcagggacttgcttcagcctcagtagcttctgggagc
cagtcaggtggaggagagggagtcccaatgagccccaggaggcagcagagaggtcacttg
acttgtgaggtgccacctgctgagaaggccttcgggggtgatcaggaatccacagatgct
tgtcagcctcctgcagtgcctggagcttcagccccacaccaaaaccccctcctctttcag
agtcaaaaacatcctgtacctcagcccttctgttcttcctctccatcttctttaaagccc
attcccaggaccaggcaaaacaggaatcagaaagttccagagactcccttgccaaaaccc
aaagtcaggctccgagggtcctccaggaagacaccctctccagtttcttctgtagccctt
gaacctcatactgccattcccacagaccaacccctcagtgctgagcccacatctcaggtc
actcggggcaggagacgtaggtcctctgtgaagacccctgaactggttgtccccacagcc
cctgagctccagccttcgatttccaaagaccagcctatcacccctgagctcacatcgcgg
atcactcggggtaggacacaaaggttctctgtcaaggcccctgaagtagttgtccctaca
gcccctgatgttcagccttccacctctaaagaccagtctgtcactcctgagctcatatct
caggacaggacacataaatttgtaaaaacccctgaaccggttatttccacagcctctcag
ctccagccttccacctccaaaggccagtttgtcctcactgagtctgtatctggggctact
cagggcagggcacgtaggtcttgtgtcaagactcccaaagcaattgtccccacagcccct
gagctccagccttctacttccaaagaccagcctgtcacccctgagcccacatctcgagtc
actcgaggcaggacacgtgggtcctctgtcaagatccctcctgaatcaactgtccccacg
gcccctgaactccagcctaccacctccaaagaccagtctgtcctcactgagcccacatct
ggggccactcatagcaggatacctaggtcttctgtcaagattcctgagctagttgtccca
acagctcctgaagtccagtcttccatccccacagaccagtctgtcacccccaaacctaca
tctcagcgcaggacatccaggtcttttgtcaagacccatgaaccaactgttcccacagcc
cctgagctccagcctaccacccccaaaggccagtctgtcacccccaaacgtaaatctcag
tgcaggacacccaggtcttctagcaagacccccaaaccagttgtccccacagtccctgag
ctccaggcttccacccccacagacgagcctgtcactcccaaactcacacctcgggccact
cggggcaggacacaaaggtcctcggtcaagacccctgagccagttgtccccacagcctct
gagctccagccttccatctccacagatcagcctgtcacccctgagcctacatttcgggcc
actcggggaaggatacataggtcctctgtcaagatcccccaaccaattgaatctacagcc
tctgaccttgaatctctcaaccccatagatcaactggtcacccctaaggctatagctgag
ggtggtcagggtaagacactaaggtctacagtaagtgctgtgccagttcttaccacccat
gaatcccagaatcctgacctcataggccagcctgttccccctgagcccatccctcaagcc
aactgcagcaggaagcggagggccacaaggaagcatgggtccttcacagctcccattgtc
catcagccccactctgcaccccctgaacctaactctcgatcctcaaagaaccaaagacga
gcagtgagagcagtggagtctcttaggaccattcccgagcctgctcttgcccagcttcct
gaggcccccactcatgctacccagatccaaaaggtagaggcagcaggcagatctgagttc
accccagagccccagtctaagccctctcagagccgcaagaggcctttggctactgtggat
tcacccccacttcaaaaacggctccaacagaagaccgtgtccctccacaaagaggaagaa
gattcagcagagagcccaaggaaggacgaggtggcagtgattccaggaccaggcaagaga
aagagagaccaaacagaggaggagcccaggggaatcccaagctgcagccttcggcgggtc
aaacctaaccaagagtccacagcacccaaagtactcttcacaggtgtggtggatgcccgt
ggagaacgggcggtgctggccctaggtgggagtctggccagctcagtggcagaggcttcc
cacctggtgactgatcgagtccgccgcacggtcaagttcctgtgtgccctggggcggggg
atccccatcctctccctggactggctgcaccagtcccgcaaggctggttgcttcttgccc
ccggatgaatatgtggtgactgatcctgagcaggagaagaactttggcttcagccttcga
gatgccctgagccgggctcgggagagaaggttgctagagggctatgagatccatgtgacc
ccaggagtccagccaccaccacctcaaatgggagagatcatcagctgctgtggaggcact
gtcctacccagcatgccccgctcctataagcctcagagagttgtgattacatgctcccag
gacttctctcgatgctctattccatttcgggttgggctgcccattctctcacctgagttc
ctgctgacaggagtgctgaagcaggaagccaagccagaggccttcatcctctccactttg
gaaatgtcatcctcgtga

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