Herpailurus yagouaroundi (jaguarundi): 121025404
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Entry
121025404 CDS
T07555
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03013
Nucleocytoplasmic transport
pyu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121025404 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
121025404 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121025404 (THOC2)
03041 Spliceosome [BR:
pyu03041
]
121025404 (THOC2)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121025404 (THOC2)
Spliceosome [BR:
pyu03041
]
Complex C
Other components
EJC/TREX
121025404 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121025404 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
121025404
NCBI-ProteinID:
XP_040323874
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNG
NSGSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPSIESKSTQEKEREKEPSRERDIAKEMKSK
ENAKGGEKPPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYLNHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaagctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttattaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaagctcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtccttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaatcgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagccg
cctgacaaccaaaaacttggtttgttggaagccttgttgaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccgtactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactatagagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttctcacgaccccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccctatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataatagtcacccacttttagtaaaa
gttaaggcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttatcacaaatacagaagtatgataacttaataacacct
gtagtagattcattgaaatacctgacttcattgaattatgatgttttggcctattgtatc
attgaagctttagctaatccggaaaaggagagaatgaaacatgacgacacaaccatctca
agctggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaataacagaggaaatgacg
atggagcaactagaggccatgactggtggagagcaactaaaagctgagggtggttatttt
ggccagatcagaaacactaaaaaatcctcccagagattaaaagatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggggtaatcttccag
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ctggtacagtttggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcaattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccacatttcgtcaaagtatgatgaacttaaaaaatca
gaaaaaggaagtaaacagcaacataaagttcacaagtacattacatcgtgtgaaatggtg
atggctcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcaattctatgccacattctggtcattgacaatgtatgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaggagaaggagcgttgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggagaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttacacagttgcaagctgtactgaaaatgaagct
agtcgatatgggcgatttctttgctgcatgttagagactgtgaccaggtggcacagtgat
cgcgccacatatgaaaaggaatgtggaaattatccaggattccttactatattacgagca
actggatttgatggtggaaataaagctgatcaattagactatgaaaactttcgacatgtt
gtgcataaatggcattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaa
tatactcacatcaggaatattttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatctgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcttcgtcgataggaagtgca
tccaaatcggacgaaagcagtactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccaaaagggaattcaagcaatgga
aacagtggctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaaaaccactgtccccagcatagaatcaaaatcaactcaagaa
aaggaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgctaaaggaggagaaaaaccaccagtttctgggtccttgaagtcacctgttccc
cgatcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccaccct
tctccatcgcattcctcaacagtaaagctggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctaccttaatcatactcct
ccaccactgtccaagagtaaggagagagaaatggacaagaaagatttggacaagtcgagg
gaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaacggaaaagggat
cattcaaacaatgaccgtgaagtgccaccggacttagccaagaggcgaaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggcgattcg
tttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa
DBGET
integrated database retrieval system
