Entry |
|
Symbol |
HDAC1
|
Name |
(RefSeq) histone deacetylase 1 isoform X1
|
KO |
|
Organism |
pyu Puma yagouaroundi (jaguarundi)
|
Pathway |
pyu03082 | ATP-dependent chromatin remodeling |
pyu04213 | Longevity regulating pathway - multiple species |
pyu04613 | Neutrophil extracellular trap formation |
pyu04919 | Thyroid hormone signaling pathway |
pyu05202 | Transcriptional misregulation in cancer |
|
Brite |
KEGG Orthology (KO) [BR:pyu00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121025405 (HDAC1)
03083 Polycomb repressive complex
121025405 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121025405 (HDAC1)
04350 TGF-beta signaling pathway
121025405 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121025405 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121025405 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
121025405 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
121025405 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121025405 (HDAC1)
05202 Transcriptional misregulation in cancer
121025405 (HDAC1)
05206 MicroRNAs in cancer
121025405 (HDAC1)
05203 Viral carcinogenesis
121025405 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
121025405 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
121025405 (HDAC1)
05165 Human papillomavirus infection
121025405 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
121025405 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
121025405 (HDAC1)
05034 Alcoholism
121025405 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:pyu03036]
121025405 (HDAC1)
Enzymes [BR:pyu01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121025405 (HDAC1)
Chromosome and associated proteins [BR:pyu03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121025405 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
121025405 (HDAC1)
BRAF-HDAC complex
121025405 (HDAC1)
REST complex
121025405 (HDAC1)
SHIP complex
121025405 (HDAC1)
MiDAC complex
121025405 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121025405 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121025405 (HDAC1)
Chromatin remodeling factors
NuRD complex
121025405 (HDAC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
498 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQVIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKGSRRRSSWPEQTSPVVASCQVSH
LSPTTPQILYFLSLCVFI |
NT seq |
1497 nt +upstreamnt +downstreamnt
atggcgcagactcagggcacccggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctacttaactatggtctctatcgaaaaatggaaatatatcgccctcacaaggccaat
gctgaggagatgaccaagtaccacagtgacgactacattaaattcttgcgctccatccgc
ccagataacatgtctgagtacagcaaacagatgcagagattcaacgttggtgaggactgt
ccggtatttgatggcctgtttgagttctgtcagttatctactggtggctctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcat
catgcaaagaagtctgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccgggaactggggacctacgggatattggggctggcaaaggcaag
tattacgctgttaactacccgctccgagatgggatcgatgacgagtcctatgaggccatt
ttcaaaccggtcatgtccaaagtaatggagatgttccaacccagtgcagttgtcttacag
tgtggctctgactccctatctggggatcggttaggttgcttcaacctgaccatcaaaggg
cacgccaagtgtgtagagtttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggcggttataccatccgtaatgtggcccgctgctggacgtatgaaacagccgtggctctg
gacacggagatcccaaatgagcttccatacaacgactacttcgaatactttggaccagat
ttcaaacttcacatcagtccttccaatatgaccaaccagaacaccaatgagtacctggag
aagatcaaacagcgactgtttgagaacctgcgaatgctgccccacgcacctggggtccaa
atgcaggtgattcctgaggatgccattccagaggagagtggcgacgaggacgaagaagat
cctgacaagcgcatctcgatctgttcctctgacaaacgaatcgcctgtgaggaagagttc
tcggactctgatgaagagggagaaggcggtcgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaactgaggatgaaaaagagaaagatccagaagagaagaaagggtcaagg
aggaggtcaagttggcctgagcagacctctccagttgtggcttcctgccaagtttcccac
ctttctcccacaacccctcagattttatattttctatctctctgtgtatttatataa |