Puma yagouaroundi (jaguarundi): 121025749
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Entry
121025749 CDS
T07555
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05165
Human papillomavirus infection
pyu05200
Pathways in cancer
pyu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121025749 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121025749 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121025749 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121025749 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121025749 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
121025749 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121025749 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
121025749 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
121025749 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
121025749 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121025749 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyu04147
]
121025749 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121025749 (COL4A5)
Exosome [BR:
pyu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121025749 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121025749 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121025749
NCBI-ProteinID:
XP_040324377
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MQLRGISLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGSPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGS
IGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPGLSIPG
SPGLDGQPGAPGLPGPPGPPGPQIPPSDDICEAGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGPTGPKGLTGIPGVPGPPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRAGLDGLPGPKGDIGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPVGQPGLHG
IPGEKGDPGPPGFDVLGPPGERGSPGIPGAPGPMGPPGSPGIPGKGGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDNGLQGQPGPPGPVGEKGGKGEPGLPGPPGPMDPDLL
GSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGHPGLPGFPGTPGLPGPKGISGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGSPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGDPGPQGPP
GRPGPTGFQGLPGPEGPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPSGIPGSTGPEGDPGLVGPPGPPGLPGPSGQSIIIKGD
VGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKG
RSIQPFISRCAVCEAPSMVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgtggaatcagcctggctgccggcttgttcttactggccctcagtctttgg
gggcagcctgcagaggctgcggcttgctatggttgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagagggtttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccacgatggagccccaggacctcaaggt
atcccaggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcgctgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccaaggacccaagggtgaaaagggtgagcaaggccttcagggaccccctgggcca
cctggacagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccgggtcct
ccaggtggtgtgaaaggtgagaaaggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatgggcagccaggaattccaggtttacctggtgatcctggttcc
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaatccctaggcctgggactggtgtaactgtgggagaaaaaggaagc
attggtttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccgcccggcctccctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggactttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcaaatccctcctagtgatgatatatgtgaagcaggccctccaggccctccagga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcaacctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtccaaccggtcccaaaggattaacaggcataccgggagttccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagcccccgggcttcctggtttacccggtacccctggacag
gatggactaccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggcccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caacccgggaagcctggtctgcctggtaacccaggaagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacccggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctacctgggccacctggg
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcctccagggcgtgctggcttggatgggcttcctggaccaaaaggtgat
attgggccaaatggacaacctgggccaatgggacctcctgggcttccagggataggtgtt
cagggaccaccagggccaccagggattcctggaccagtaggccaacctggcttacatgga
ataccaggagagaagggagatccaggacctcctgggtttgatgttctaggaccccctggt
gagagaggcagtccaggaattcctggagcacctggtcctatgggacccccaggatcacca
gggattccaggaaaaggaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgataatggtttgcagggtcagccaggacctcctggccctgtaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccaatggatccagatctgctg
ggctcaaaaggagagaagggtgaccctggattaccaggtattcctggagtttcaggacca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcattggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcccggatatccaggaaacccgggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacatccaggcctt
cctggattccctggaaccccaggacttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggcggtcgtcctgggccacca
gggcctccaggtgaaaaaggcagtccgggtcaagatggtatccctggcccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggacttcctggt
ccaaagggagaaccaggctttcagggttttcctggtgtgcagggtcctccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcgaccctgggccccaaggtcctcct
gggagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccccggggtctc
cctggaaatggaggtattaaaggagagagaggaaacccaggccaacctgggcaacctggt
ttgcctggtttgaaaggagatcaaggaccaccaggactccagggtaatcctggtcggcca
ggtctcaatggaatgaaaggagatcctggtctcccgggtgttccaggatttccaggcatg
aagggacccagtggaatacctggttcaactggccctgaaggggatccaggacttgttggc
cccccaggtccccctggattacctggtccttcaggacagagtattataatcaaaggagat
gttggtccaccagggatcccaggccagcctggattaaaaggtctaccaggactaccagga
cctcaaggcttaccaggtccaattggccctccaggagatcctggacgcaacggactccca
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggccagccaggtacc
cgtggtttggatggtccccctggaccagatggattgcagggtcccccaggccccccagga
acctcctctattgcccatggattcctcatcacacgtcacagccagacaacagacgcacca
caatgcccacatggaactgtccagatttatgaaggcttttctctcttgtatgttcaagga
aataaaagagctcatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacatcaataatgtttgcaactttgcttcaagaaatgac
tattcttactggctgtccaccccagagcccatgccaatgagcatggaacccctgaagggc
cggagcatccagccattcattagtcgatgtgcagtatgtgaagctccctccatggtgatt
gcagttcacagtcagaccatccagattccccactgtcctcagggatgggattctctctgg
attggctattccttcatgatgcacacaagcgcaggagcagagggctcaggtcaagccctg
gcctcccctggttcctgcttggaagagttccgttcagctcctttcattgaatgtcacggc
cggggtacctgcaattactatgccaactcctacagcttttggctagcaactgtagatatg
tcagacatgttcagcaaacctcagtcagaaacgctgaaagcaggagacttgaggacacga
attagccgatgtcaagtgtgcatgaagaggacataa
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integrated database retrieval system
