Puma yagouaroundi (jaguarundi): 121025762
Help
Entry
121025762 CDS
T07555
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04382
Cornified envelope formation
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05165
Human papillomavirus infection
pyu05200
Pathways in cancer
pyu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121025762
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121025762
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121025762
09142 Cell motility
04820 Cytoskeleton in muscle cells
121025762
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121025762
09154 Digestive system
04974 Protein digestion and absorption
121025762
09158 Development and regeneration
04382 Cornified envelope formation
121025762
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121025762
09162 Cancer: specific types
05222 Small cell lung cancer
121025762
09172 Infectious disease: viral
05165 Human papillomavirus infection
121025762
09174 Infectious disease: parasitic
05146 Amoebiasis
121025762
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121025762
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyu04147
]
121025762
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121025762
Exosome [BR:
pyu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121025762
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121025762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121025762
NCBI-ProteinID:
XP_040324419
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGGCKCFPEKGARGRPGPIGIQGPT
GPQGFDGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGDVGYPGPDGYPGLLGPPGLPGQKGSKGEPVLAQSSFKGIKGEPGLPGLDG
ITGPQGAPGPPGALGPMGLPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGRPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGLPGLPGISGPPGLPGFGTAGEKGEKGIPGLPGPRGP
MGLEGLQGPPGSQGKKGSSGFPGFNGFPGIKGEKGGIGLPGPDVYIDTDGAVISGYPGDP
GVPGLPGLKGDEGIQGLPGTSGLPGLPALPGVPGALGHQGVPGLKGDKGDPGRTTVGAAG
PPGRGGLPGLPGLAGPPGRIFETGTLQNTEPGFPGLRGERGPKGNPGLKGIKGDSGFCAC
DGGVPNIGPPGEPGLPGSQGLIGLPGLKGTRGDPGPGGTQGPSGTPGLFGPRGPAGRKGE
KGEPTLSSRSRMPGERGDPGPQGLPGKTGVPGKDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHSGPAGPPGNGLPGSPGPRGLPGDQGIDGLPGKQGLPGLPGDCCCRESIGKGG
LDTEGGVTLPCIIPGSYGPSGLPGAPGFPGPKGARGLPGIAGHPGLRGNKGKAGSPGLVH
LPELPGFPGPHGEKGLPGFPGLPGKDGLPGKIGSPGLPGSKGASGDIYGAENGAPGEQGI
QGLPGDQGFPGDPGLPGPKGLPGKSGLLGPKGERGRPGTPGHVGQPGSPGPDGRFGIKGK
PGFPGAPGFPGHSGHPGKKGLRGETGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGS
TGLPGLPGPKGEKGSAGLVGFPGIPGLPGIPGASGLKGISGSAGKVGPSGRAGSAGKKGD
RGDPGPAGIPSPQPPILNLQLKGDKGSRGSAGSYGFPGPRGDKGEAGPPGPPGLPGVPGL
PSIIKGLKGKPGPPGSIGLRGLPGLKGSPGITGFPGIPGASGSQGLNGAPGLPGASGLPG
SKGDQGQTLGISGSLGLKGQPGASGFKGVKGKDGLAGDVGFPGSKGEDGKVGISGDVGLP
GSPGLPGIAGMRGNPGLPGSAGHPGATGPLGAPGLIGTKGFPGLPGLHGLNGLPGTKGTH
GTPGPSITGVPGPAGLPGRKGEKGSPGIGIGAPGKPGVKGQRGGRGFPGFQGPAGLPGAP
GLSLPSVIGGQPGEPGRPGLDGERGRPGPPGPPGPPGLSSDQGDPGDPGFPGIPGRQGPK
GDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKVGPPGDPGLPGMKGKAGPRGFSGPRGAP
GQTPIAEAVQVPPGPMGQPGMDGIPGLTGDPGVQGPVGLQGSKGLPGIPGKDGLNGLIGP
PGPLGDPGLPGLQGPPGLEGAPGKKGPFGTAGMPGQSARVGYTLVKHSQSEQVPLCPVGM
SQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYAGRNDKSYWLS
TTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMH
TAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFREE
TVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggccgga
gcgggagagaagtcttatggaaagccatgtggaggccaagactgcagtggaggctgtaaa
tgctttcctgagaaaggagcgagagggcgaccaggaccaattggaattcaaggtccaaca
ggtcctcaaggatttgatggccctagtggtttatcagggttgaaaggagaaaggggctcc
ccaggtcccctgggaccatatggaccaaaaggagataagggtcccatgggagttcctggc
tttcttggcatcaatgggattccgggccacccaggacagccagggcccagaggcccacct
ggcctggatggctgtaatggaactcaaggagatgttggatatccaggccccgatggctat
cctgggcttcttggaccacccgggcttcctggccagaaaggctctaaaggtgaacctgtc
cttgcccaaagtagtttcaaaggaataaagggggagcctggactgcctggactggatgga
atcactggcccacagggagcacccggacctccaggagctttaggacccatgggactacca
ggattgcaaggtcctccaggtcctcccggtttccctggtcctgatgggaatatggggtta
ggtttccaaggagagaaaggagtcaagggggatgttggccgcccaggccctgcaggaccc
ccaccatctactggagaactggaatttatgggatttcccaaagggaagaaaggatccaag
ggtgaaccagggcttccaggtttaccaggaataagtggccctccaggtctcccgggattt
ggaactgctggagaaaagggtgaaaagggaatccctggtttgccaggacctaggggtccc
atgggtttagaaggactccaaggccccccagggagtcagggcaagaaagggtcctcaggt
ttccctggatttaatggatttccaggaattaagggcgaaaagggtggcattggcttgcca
ggcccagatgtttacatcgatacggatggtgctgtgatctcaggttaccctggagaccct
ggtgtgccaggcctcccaggacttaaaggagatgaaggcatccagggcctgcctggaact
tccggcctccctggcttgccagctttaccaggtgtcccaggtgccctagggcaccaagga
gttccaggtctcaagggggacaaaggagacccaggccgcaccacagttggggcagctggc
ccccctggcagaggcggtttgccaggcttaccaggcctagcaggcccacctggtcgaata
tttgagactggaacactacagaacacagagccagggttccctggtctccgaggagaacga
ggtccaaaaggaaacccaggcctcaaaggaataaaaggcgactcggggttttgtgcttgt
gatggcggtgtccctaacattggaccacctggggagccaggcctgcctgggtcacaaggt
ctcattggccttccaggccttaaaggaaccagaggagatccaggccctgggggtacacag
ggcccatcagggactccaggtttatttggacctcggggtcctgcaggccgcaaaggagag
aaaggggagccaactctcagttcaagatcaaggatgccaggggagcggggtgatcctggc
ccccaggggctccctggtaaaacaggagtcccagggaaggatggagtaccaggtttacca
ggtctgccaggcctcccaggtgatggtggacagggcttcccaggtgagaaggggttacca
ggacttcctggtgaaaagggccacagtggtccagctggtcccccaggaaatggactgccg
ggatctcccggacctcgtgggcttcctggagatcaaggaatagatggattaccagggaag
caaggcctccctgggcttccaggtgactgttgctgcagggagagcattggtaaaggaggc
ttagacacagaaggaggggtcaccttgccgtgtataattcctggatcatatggtccatca
ggcttaccaggagctcccggattcccaggtcctaagggggcccgtggcctccctgggatt
gcaggccatcctggattgcgtggaaataaaggaaaggctggaagtccaggattagttcac
cttcctgaactgccaggatttcctggacctcatggggagaagggcttgcctgggtttcct
gggctccctggaaaagatggcttgcctgggaaaattggcagtccaggtttaccaggttcc
aaaggagcctctggtgacatctatggtgctgaaaatggtgctccgggggagcaaggcata
cagggattgccaggggaccaaggatttcctggagaccctggccttccaggacccaagggt
ctgcctgggaagtcaggcttgctgggccccaaaggtgaacggggcaggcctggaacacca
ggccatgtgggacagccaggatccccagggcctgatggccgatttggcatcaagggcaaa
cccgggttcccaggagcaccaggctttccaggccattcaggacatcctggaaagaaaggt
ttaagaggcgagacaggtccccctgcatcagctggaaagagaggcctgcctgggttgaaa
ggccttccaggatctccagggctgattggcttcttggggaactcaggcttgccagggagc
actgggttgccaggcctgccgggtccaaagggtgagaagggatctgctgggctggtaggt
tttccagggataccaggtctccctggtattcctggtgcaagtggattaaagggcatttct
gggtcagccggaaaggtgggaccatctggacgggctggtagtgctggtaaaaaaggagac
agaggtgacccagggccagctggaatccccagtccacaacctccaatcctgaacctgcag
ctgaaaggagacaaaggctctagaggctcagctggatcttacggatttcctgggcccaga
ggtgacaaaggagaggctggccccccagggccaccaggcttacctggagttcccggcctc
cccagtatcatcaagggacttaaagggaaaccaggcccccctggctccattggattacgg
ggcttacccggccttaaagggtcccctggaatcacaggtttcccaggaataccaggagca
agtggttcacagggtctcaatggagctcctggactcccaggagcatctggtctcccaggt
tcaaaaggagatcaaggccagacccttggaatttccggtagcctgggactcaagggacaa
cctggggcatctgggttcaaaggtgtgaaaggaaaagatggactagctggtgacgtgggt
ttcccaggaagcaaaggtgaagatggcaaagttggtatttctggagatgttggccttcct
ggctccccaggactccctgggattgcaggcatgagaggaaatccagggctaccgggttct
gcaggccatccaggggccactgggcccctgggagcccccggcctaataggaaccaaaggt
ttccctggacttcctggtttacatggactgaatgggcttccaggaaccaagggaacccat
ggaactccaggacctagtataaccggtgtgcctgggccagctggcctgcctggtcgcaaa
ggggaaaaaggttctccaggaattggcatcggagccccagggaagccaggagtgaaagga
cagagaggtggtcgaggtttcccaggcttccagggacctgctggtctgcccggtgcccca
ggcctctccttgccttcagtcataggaggacagcctggcgaacccgggcgaccaggccta
gatggagagcgaggccgcccaggccctccagggcccccagggccccctgggctatcctct
gatcaaggtgaccctggagaccctggcttccctggaattcctggccgtcaagggcccaag
ggagaccaaggaattccaggtttctctggccttcctggagagctaggactgaaaggcatg
agaggtgagcctggcttcatggggattccaggcaaggttgggccacctggagacccagga
cttcccgggatgaaggggaaggcagggccaagaggcttttccggaccccggggtgctcct
ggacaaacaccaattgcagaagctgtccaggttcctcctggacccatgggtcaaccgggc
atggatggcatccctggcctcacgggagaccctggggttcaaggccctgtaggcctacaa
ggctccaaaggattacctggcatccctggaaaagatggtctcaacggactcattggccca
cctgggcctcttggtgatcctggtctccctggactgcaaggccctccaggactcgaagga
gctccagggaagaagggtcccttcgggacggctggaatgcctgggcagagcgcgagagtg
ggttacacgttggtgaagcacagccagtcggaacaggtgcccctgtgtcccgtcgggatg
agccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaagcccacaac
caggacctgggatttgctggctcctgcctgccccgcttcagtaccatgcctttcatctat
tgcaacatcaacgaagtgtgccactatgctgggcgcaatgataaatcctactggctgtcc
accaccgcccccattcccatgatgcccgtcggccagacccagattccccagtacatcagc
cgctgttctgtgtgtgaggcaccctcacaagccattgctgtgcacagccaggacatcacc
atcccgcagtgccccctgggctggcgcagcctctggattgggtactccttcctcatgcac
actgctgctggcgccgagggcgggggccagtccctggtctcacccggctcctgcctggag
gattttcgtgccactcctttcatcgagtgcagtggggcccggggcacctgccactacttt
gccaacaagtacagtttctggctgacaacagtggaagagaggcagcagtttagggaggaa
actgtatctgaaacactgaaggctgggcagctccatacccgggtcagccgctgccaggtg
tgtatgaaaagcctgtag
DBGET
integrated database retrieval system
