Entry |
|
Symbol |
SFPQ
|
Name |
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
|
KO |
K13219 | splicing factor, proline- and glutamine-rich |
|
Organism |
pyu Puma yagouaroundi (jaguarundi)
|
Brite |
KEGG Orthology (KO) [BR:pyu00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:pyu01009]
121025971 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pyu03021]
121025971 (SFPQ)
03041 Spliceosome [BR:pyu03041]
121025971 (SFPQ)
Protein phosphatases and associated proteins [BR:pyu01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121025971 (SFPQ)
Transcription machinery [BR:pyu03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121025971 (SFPQ)
Spliceosome [BR:pyu03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121025971 (SFPQ)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
701 aa
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQGGPKPPI
PPPPPHQQQQQPPPQQPPPQQPPPLQPPPHQPPHQQPPPPPQDSSKPVVPQGPGPAPGVG
SAPPASGSAPPATPPTSGAPTGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPPQAGGP
PPPPAGGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQ
HHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPA
DITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRF
ATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARK
AFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTF
EYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEEL
RRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPR
ERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTER
FGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF |
NT seq |
2106 nt +upstreamnt +downstreamnt
atgtctcgggatcggttccggagccgtggcggtggcggtggcggcttccaccggcgcgga
ggaggcggcggccgcggcggcctccacgacttccgctccccgccgcccggcatgggcctc
aatcagaaccgcggacccatggggcccggcccgggccagggtggccccaagcccccaatc
ccaccaccgcctccgcaccagcaacagcagcagccaccaccgcagcagccgccaccacag
cagccgccgccacttcagccaccaccgcatcagccgccgcatcagcagccgccgccgccg
ccacaggactcgtccaagcccgtcgttcctcagggacccggcccggctcctggagtgggc
agcgctccgccggcctccggctcggcaccgcccgccactcccccgacctctggggcccct
acgggcccaggccccaccccgaccccgccgcccgctgtcacctcggcgccccccggggcg
cccccgcccgcgccgccgagcagcggtgtccccaccaccccacctcaggccgggggcccc
ccgcctccacccgcagggggcccgggacccggtcctaagcagggcccaggacccgggggc
ccgaaaggcggcaaaatgccaggcgggccgaagcccggcggcggcccgggcctaagtact
cctggcggccaccccaagccgccacaccgaggcggcggggagccccgaggaggccggcag
caccacccaccctaccaccagcagcaccaccaggggcccccacccggcgggcctggtggc
cgcagcgaggagaagatctccgactcggaggggtttaaagccaacttgtctctcttgagg
aggcctggagagaaaacttacactcagcgttgtcggttatttgttgggaatctacctgct
gatatcacagaggatgaattcaaaagactatttgctaaatatggagaaccaggagaagtt
tttatcaacaaaggcaaaggatttggatttattaaacttgaatctagagcactggctgaa
attgccaaagctgaacttgatgatacaccgatgagaggtagacagcttcgggttcgcttt
gccacacatgctgctgccctttctgttcgaaacctttcaccttatgtttccaatgaactg
ttggaagaagcttttagccagtttggtcctattgaaagggctgttgtaattgtggatgat
cgcgggagatctacagggaaaggcattgttgagtttgcttccaaaccagcagcaaggaaa
gcatttgaaagatgcagtgaaggtgttttcttactaacaacaactcctcgtccagtcatt
gtggaaccacttgaacaattagatgatgaagatggccttcctgaaaaacttgcacagaag
aatccaatgtatcaaaaggagagagaaacccctcctcgttttgcccagcatggcacattt
gagtatgaatattctcagcgatggaagtccctggatgaaatggagaaacagcaaagggag
caagttgaaaaaaacatgaaagatgcaaaggacaaattggaaagtgaaatggaagatgct
tatcacgaacatcaggcaaatcttttgcgtcaagatctgatgagacgtcaggaagaatta
agacgcatggaagaacttcataatcaagaaatgcagaaacgtaaagaaatgcagctaagg
caagaagaagaacgacgtagaagggaagaagagatgatgattcgtcaacgtgaaatggaa
gaacaaatgaggcgccaaagagaggaaagttatagccggatgggctacatggatccaaga
gaaagagacatgagaatgggtggaggaggagcaatgaacatgggagatccctatggttca
ggaggccagaaatttccacctctaggtggtggtggtggcataggttatgaagctaatcct
ggagttccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgc
tttgggcagggaggtgcgggacctgtgggtggacagggtcctagaggaatggggcctgga
actccagcaggatatggtagagggagagaagagtatgaaggcccaaacaaaaagccccga
ttttag |