Herpailurus yagouaroundi (jaguarundi): 121026129
Help
Entry
121026129 CDS
T07555
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu04613
Neutrophil extracellular trap formation
pyu05014
Amyotrophic lateral sclerosis
pyu05034
Alcoholism
pyu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121026129 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
121026129 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121026129 (HDAC6)
09165 Substance dependence
05034 Alcoholism
121026129 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pyu01009
]
121026129 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121026129 (HDAC6)
04131 Membrane trafficking [BR:
pyu04131
]
121026129 (HDAC6)
03036 Chromosome and associated proteins [BR:
pyu03036
]
121026129 (HDAC6)
Enzymes [BR:
pyu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121026129 (HDAC6)
Protein phosphatases and associated proteins [BR:
pyu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121026129 (HDAC6)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121026129 (HDAC6)
Membrane trafficking [BR:
pyu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121026129 (HDAC6)
Chromosome and associated proteins [BR:
pyu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121026129 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121026129
NCBI-ProteinID:
XP_040324906
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPTLESPGAPCPSA
LASLCCALEALEPFWEVLLRSVQTPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQAR
TGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAELLTCH
SAEYVGRLRATEKMKTRELHRECSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLN
GTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDTDYLTAWH
RLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALVSIIDTIQVHRRYWRSLRVMKVE
DKEEPSLSKSVTNPGSAKRMTTPEGNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQ
DQSLEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPE
QGATSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANT
DQAIFYAVTPLPWCPHLVAVCPTPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSA
HMLQHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQALLEVKNIAHQNKFGEDMPHSH
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgaacggctccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggacgaa
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctacatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaaggaacc
cagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttatgagcag
ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggtcgtggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactatatt
gctgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccaccactcca
gcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctg
tctctggagggtggctacaaccttcgctccttggctgagggcgtcagtgcctcactccac
acccttctgggagacccttgccccacactggagtcccctggcgccccctgcccaagtgcc
ctggcgtcactgtgctgcgctctggaagccctggagcccttctgggaggtccttctaaga
tcagttcagaccccggaggaggacatcctggaggaggatagcgcagaggagaaggatgaa
gagggactgtggcggcccccagcgctcccgatcctgacgtggcccatgctacaggctcgc
acagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccac
ccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcg
gggcgctgcctcgcgctgcccgcacgtcccgccacggaagccgaactgctcacctgccac
agtgctgagtacgtgggtcgtctgcgggccacagagaagatgaaaacccgggagctgcac
cgcgagtgttccaactttgattccatctacatctgccccagcaccttcgcctgtgcgcag
ctggccactggcgccgtctgccgcctggtggaggctgtgctggcaggagaggttttgaat
ggtaccgctgtggtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttc
tgcttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcg
ctgcggatcctgatagtggactgggatgtccatcatggtaatggaactcagcacatattt
gaggaggaccccagcgtactgtacatttccctgcaccggtatgaccatggcaccttcttt
cccatgggggaggagggtgccagcagccagataggccgtgccgcaggcactggcttcact
gtcaacgtggcctggaatggaccccgtgtgggtgacactgactacctgaccgcgtggcat
cgcctggtgcttcctattgcctacgagtttaacccagagctggtgctggtctcagcgggc
tttgacgctgcatggggggacccactggggggctgccaggtgtcgcctgagggctatgcc
cacctcacccacctgctgatgggccttgccaatggccgcattatcctaatcctagagggt
ggctataacctgacgtccatctcggaatccatggctgcctgtacccgctccctccttggg
gacccaccaccactgctgaccttgtcgcggcctccactatcaggggccctggtctcaatc
atcgataccatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaa
gacaaggaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatg
accacgccagaagggaacattctggatgcaggcacagagaaggctgtctcagcatcatct
gtggaagagtccactctgggccaacctaagtcagagactgctatggtggagctcagtcag
gaccagtccttggaggctcccacacagaaagccatgctggaccagaccacctcacaggca
gccacagtggaggccacagcaggccagaccacctcagaggaggctgttgggggagctgag
atgatccaaacccctccagctttatgtactgacaaccagactcctacagcctcacctgag
caaggtgccacatcccaaatatcccccagtgagctgattgagaatctccggaccttggaa
ctaaactgcaaggctcaggaggcaccagaatctcagatcccagaagaggataagctactg
ggagaggcagctggaggtcaggacatgctgattcagagctttggggtccatgctaacact
gaccaggccatcttttatgccgtgacaccgctgccctggtgtccccatttggtggcagta
tgtcccacacctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactc
caggagaactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcc
catatgctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctg
tctacctggtgttacagctgtgaggcctatgtccaccaccaggctctcctagaagtgaag
aacatcgcccaccagaacaagtttggggaggacatgccccactcacactga
DBGET
integrated database retrieval system
