Herpailurus yagouaroundi (jaguarundi): 121026903
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Entry
121026903 CDS
T07555
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu03015
mRNA surveillance pathway
pyu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121026903 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
121026903 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121026903 (PABPC4)
03041 Spliceosome [BR:
pyu03041
]
121026903 (PABPC4)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121026903 (PABPC4)
mRNA cycle factors
Stress granule specific factors
121026903 (PABPC4)
Spliceosome [BR:
pyu03041
]
Complex C
Other components
Complex C specific factors
121026903 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
121026903
NCBI-ProteinID:
XP_040325677
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gccgagcttggagccaaagccaaggagttcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagcctgaaagagctgtttagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgcgcacagaagaaagtggaacggcaggccgagttaaagcggaaattt
gaacagctgaagcaagagagaattagtcggtatcagggagtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaagaaaagagttttctccttttggatcaatc
accagcgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcggtcactgagatgaatggacgcatcgtgggctcc
aagccgctgtacgtcgcccttgcccagagaaaggaagagagaaaggctcacctgaccaac
cagtatatgcagcgggtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctactttgtgccagcagttccacaggctcagggaagacct
ccgtattacacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
accttagcacctcgtgctgctgttgctgctgctgctcctcgggctgttgcaccttataaa
tacgcttccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagcccttgaccgcctccatgttggctgcagcacccccc
caggaacagaagcagatgttgggagaacgtttgttcccactcatccaaaccatgcattca
aacctggctggaaaaatcacaggaatgctgctggagattgacaactctgagctgctgcac
atgctggagtcccctgagtctctccgctccaaggtggatgaagctgtggcggttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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