Puma yagouaroundi (jaguarundi): 121027407
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Entry
121027407 CDS
T07555
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04820
Cytoskeleton in muscle cells
pyu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121027407 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121027407 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121027407 (COL24A1)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121027407 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121027407
NCBI-ProteinID:
XP_040326778
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MHLGAHRTRRGKVSHTAKTKLLLHFIVLCVADSAVHAQEQGIDILHQLGLGDKDVRHSSS
VTAVPSSSTPLPQGVHLTESGVILTNDAYIESPLMKILPFNLEQPFTILIGLQSHRVNNA
FLFSIRNKNRLQLGVQLLPKKLVVYLGGKQSVFFNYSVHDERWHFFAITIRNQVVSMSVE
CGKKYFSRETLLEVQTFDSNSVFTLGSMNNNSVHFEGIVCQLDIIPSAEASANYCRYVKH
RCHPETNHLHTTIVPAEILENSPLPKQFGEKVLSEDTFTKGKNIPNIINNDSATVHKQQD
HQIPKSQFISLHSRNVSAVDLVNHGIQDKEMITEEHTQTNLSLSMTHHLKKAKTNSKEKF
GSFSNVSDNVTQHNDKLTGLSPFKKISSILPHIKQETITNLKKAITANLHTNELMELQQI
LNTTLYRVTDEPSVDNHLDLRKEGEIDPDATYPIENSYETDLYDYYYYYEDLNTMLEMEN
LRGPKGDTGPPGPPGPAGIPGPSGRRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQA
VPGKKGSQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEPGIPGFTGNIGSRGYPGRQGVAG
PEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGFPGDFGDRGPAGPDG
SPGLVGSIGPPGFPGLRGSVGPIGPFGPSGIPGPVGLSGNKGLPGIKGDKGEQGIAGEPG
EPGYPGDKGAVGVPGPPGMRGKPGPSGQMGDPGPQGPCGPPGPEGFPGDIGIPGQNGPEG
SKGLLGNRGPPGPPGLKGPQGEEGPVGLFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQG
NVGKIGETGPVGLPGEVGITGSIGEKGERGSPGPQGPQGEKGVMGYPGPPGDPGPIGALG
LPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGSKGEKGDQGKRGPYGLTGKTGNPG
ERGIQGKPGLQGPPGSTGDKGLEGEPGPRGLPGDAGPPGETGAEGPSGIEGEAGLQGEPG
AKGNAGPTGNVGVAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPG
ASGPLGGPGLMGPPGSEGIVGIPGQRGRPGKKGEKGQIGPTGEIGSRGAPGQIGESGPKG
ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVLGPPGPR
GEPGPVGEQGERGEPGAEGYKGHMGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPK
GKKGTPGPAGKPGIPGLPGLPGPKGMQGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRT
GPAGSPGPRGAKGPSGLPGSPGVPGPKGEQGLPGQPGIQGKRGHGGAQGDQGPRGEPGLK
GQPGEHGVQGLTGFQGFPGPRGPEGDAGIIGISGPKGPVGQRGNTGPFGKEGIIGPTGRT
GPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESHAALQMENYQNT
EVTLIDYGAEISKTLNYLSNLLHSIKNPLGTRDNPARICRDLLNCEHKVSDGKYWIDPNL
GCPSDAIEVFCNFSAGGQTCLSPVSVTKLEFGVGKVQMNFLHLLSSEATHIITIHCLNTP
VWTSAQSSGSGLPIGFKGWNGQIFEENTLLEPKVLSDDCKIQDGSWHKAKFLFHTQDPNQ
LPVIEVQKLPLLKTDRKYYIESSSVCFL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagcccacaggacaaggcgtggaaaggtctcccacacggcaaaaacgaaa
ctgcttcttcattttattgtgctatgtgtggcagacagtgctgttcatgcacaagaacaa
ggcatagatattcttcatcaactaggccttggagacaaagatgtaagacactcatcatca
gtgactgctgtaccatcatcatctacaccattacctcagggggtccatttaacagaatca
ggtgtcattttaacaaatgatgcttatattgagtcacctctcatgaaaattttaccattc
aacttagaacagccatttacaatattaattgggttacagtcacatagagtaaacaatgca
tttctcttcagcattagaaataaaaatagactgcaattaggagtgcaattattacctaaa
aaattagtagtataccttggaggaaagcagtctgtgtttttcaactacagtgttcatgat
gagcgatggcacttctttgccattactattagaaaccaagttgtttcaatgtctgttgag
tgtggaaagaaatattttagcagagagactcttttggaagtccagacttttgattctaac
agtgtgtttacactaggaagtatgaataataattctgtccattttgaaggaatagtatgt
cagttggatattattccttctgcagaagcatctgcaaactattgtagatatgtgaaacat
cgttgtcaccctgagacaaaccatcttcatacaaccatcgtaccagctgagatactggaa
aactctcccttgcccaaacaatttggtgaaaaagtgctgtctgaggacacatttaccaaa
ggcaaaaacattccaaatatcataaataatgattctgcaacagtccataagcaacaagat
caccaaataccaaaatctcaattcatttctcttcattcaaggaatgtttctgctgtggat
cttgtaaaccatgggattcaagacaaagaaatgatcactgaggaacatactcagacaaat
ttaagtctgtcaatgacccatcacctcaaaaaggcgaaaacaaatagcaaggagaaattt
ggttctttttcaaatgtatccgacaatgtcacacaacataatgataaactaactggtctg
tcaccatttaagaagatatcatctattcttccacatataaaacaagaaacaattactaat
ctcaagaaggctatcacagcaaatctacacactaatgaactcatggaactgcaacagatt
ttaaacacaaccttatacagagtgacagatgagccatctgtggacaatcaccttgaccta
aggaaggaaggtgaaattgatcctgatgctacctatcccatcgaaaatagctatgagact
gacctttatgattattattattattatgaggatcttaataccatgctcgaaatggagaat
ctgagagggccaaaaggggacactggacctcccggtccacctggtccagcaggcatccca
ggcccatcaggaaggagaggtccacggggcataccagggccacatggaaatcctgggtta
cctggattaccaggtccaaagggccccaaaggagatccaggactttcccctggtcaagct
gttcctggaaaaaagggcagtcaaggcctttctggattaatgggcccccctggtatgcaa
ggtgataagggtctcaaaggccatccggggctcccaggtctccgaggtgaaccaggaatt
ccaggattcactggtaatattggttcacgtggttaccctggcaggcagggtgtagctgga
ccagaaggtaatccaggtcctaaaggtatacgaggttttattggctctcctggagaagta
ggacaactgggacctgaaggagaaagaggtgttcctgggatccggggaaagaagggtctt
aagggaagacagggttttccaggtgactttggagacagaggccctgctggccctgatggc
agtcctggacttgtaggtagcattggccctccaggatttcctgggcttagaggcagtgtt
ggccctattggaccatttggaccttctggaattcctggccctgtgggtctttccgggaat
aagggcctacctggaatcaaaggtgataagggtgagcaaggcattgcaggagagccagga
gaaccagggtatcctggagacaagggtgctgttggtgttccaggaccaccagggatgaga
ggaaagccaggaccttcaggccaaatgggtgacccaggaccccaaggaccatgtggccct
ccaggaccagagggttttccaggagatattgggattcctggacaaaatggccctgaagga
tctaagggactccttggaaataggggacctccaggacctcctggtctcaaaggacctcag
ggagaagaaggaccagttggactctttggagaactgggaccaagaggaaaaccaggtcaa
aaggggtatgcaggtgaaccaggaccagaaggcttaaagggagaagtaggagatcaagga
aatgttggaaagattggtgaaacaggacctgtcggtttacctggagaagttgggattact
ggaagcattggtgaaaagggagaacgtggaagtccaggtccacaaggtccccagggggaa
aagggtgtcatgggatatccaggtcctcccggggatccaggacccattggtgccctggga
ttacctggtcatgtgggagcaagaggaccacctggaagtcaaggtcctaaaggacaaaga
ggaccaagaggaccagatggtctcctaggggaacaaggtatacaaggttccaagggtgaa
aaaggagatcaaggaaaaagagggccttatggtcttactggtaagactggaaaccctgga
gagagaggaattcaagggaaaccaggtttacaaggaccccctgggagtacaggagacaaa
ggacttgaaggagaaccaggaccacgaggattgccaggtgatgctggaccccctggagaa
acgggtgctgagggcccttcaggtattgaaggagaagcaggtctgcaaggtgaaccaggt
gcaaagggaaatgctggacctacaggcaatgttggagttgctggagaaccagggttacgg
ggtgaaccaggagcacctggagaagaaggtctccaaggaaaagatggattaaagggaaac
ccaggaggaaggggtcttcctggagaagatggagaaaaaggagagacgggcttaccaggg
gcttcaggacccttgggtggaccaggtctgatgggtcctccgggatctgaaggaattgtg
ggaattccagggcaaagaggtcgcccaggcaaaaagggtgaaaaaggacaaatagggccc
accggagaaattggaagcagaggtgctcccggacaaattggggaaagtggtcctaagggt
gccagaggaacgagaggtgctgtgggacatttaggattgatgggacctgatggagaacca
ggaattccaggatataggggccaccagggccagccaggcctttctgggctgccaggacct
aaaggagaaaagggttatccaggagaagatagcacagtgctaggaccacctgggcctcga
ggtgaaccaggtcctgtgggggaacaaggagagagaggagagcctggagcagagggctat
aagggtcacatgggtataccaggaccaagaggtgctactggacaacaagggcccccaggt
gagccaggtgaccagggtgaacaaggactaaaaggagagagaggatctgaaggtcctaaa
gggaaaaaaggcactcctggccctgctgggaaacctgggattcctggtcttccaggccta
cctgggccaaaaggcatgcaaggataccatggagccgatggcatttcaggaaactctgga
aaagttgggctaccaggaaaacagggacttcctggcaccagaggcagcccaggaagaaca
ggaccagctgggtctccaggtcctcgaggagccaaggggccatcaggccttccaggaagc
ccaggggttccaggcccaaagggcgaacaaggactacctggacaacctggaattcaaggt
aaaagaggccacggaggagcacaaggtgatcaaggaccacgtggagagcctggccttaaa
gggcagcctggagaacatggtgtccaaggtttgacaggtttccaaggattcccaggcccc
aggggtcctgagggagatgctggcatcattggaatatcaggtcctaaaggtcccgttgga
cagagaggaaacactggcccctttggcaaagaaggtataataggcccaacaggtagaact
ggacccagaggtgaaaaaggctttagaggtgaaactggtccccaagggccaagaggtcaa
ccagggcctccaggtccacctggagcacctggcccaagaaaacaaatggatatcaatgct
gctattcaagccttgattgaatcacatgctgccctacagatggagaactaccaaaatact
gaagtgactctaattgactacggtgcagagatatccaaaaccctgaactaccttagcaat
ttactgcacagcatcaagaatcctcttggcacacgagataacccagcacgaatctgcaga
gatttgcttaactgtgaacacaaagtatcagatggaaaatactggattgatccaaatctt
ggatgcccttcagatgccattgaggttttctgcaatttcagtgctggtggtcagacatgt
ttatctcctgtttctgtaacaaagttggagtttggagttggaaaagtccagatgaacttc
cttcacttactgagctcagaagccacccatatcatcactattcactgtctaaacacacca
gtgtggacaagtgctcagtcaagtggctcaggattacctattggcttcaagggatggaat
ggccagatttttgaagaaaacactctacttgaacctaaggtgctttcagatgactgcaag
attcaagatggcagctggcataaggcaaaattcctttttcacacccaggaccctaatcag
cttccagtaattgaagtacaaaaacttcctcttctcaaaactgacaggaagtactacatt
gaaagcagttctgtatgctttctctaa
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