Herpailurus yagouaroundi (jaguarundi): 121027684
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Entry
121027684 CDS
T07555
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pyu03041
]
121027684 (DDX20)
Enzymes [BR:
pyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121027684 (DDX20)
Spliceosome [BR:
pyu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
121027684 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
121027684
NCBI-ProteinID:
XP_040327235
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MAAAFEASAALETVEAAMPAERVAAQLAASEPPPGPVRSLRTAHDVSGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEYLANALTRYMRDPTFVRLNSSDPSLLGLKQYYRVVNSYPLAHKIFEEKAQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
VMMKIAQKCNINLLPLPDPIPPGLMEECSDWDVEVQAAMHTYGLASVPTQPLKKQIQKIE
RTFPTPKAHGNHVASSRNTSVSALLVKSKNNTKQKLPVKSHSECGIIEKAVSPKEVGCGI
QLEEPMKNSVQISVENSTGQHQVKEAIPVSLPKIPCLSSFKIHLPYSLTFSELVEDYEHY
IKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRIPEERVQVLASSSQSGDSESDSDSYSS
RTSSQSKGNKSYLEGSSDTQPKDAESTRVDGHISLEQPLNGNNIPNPVEYQESPEIQTKA
RHKEGATQRAKQSRRNPPRRSSCRMQTEPQEDGWYDCHRETHLNFSETYQDYEEYWRAYY
RAWQEYYAAASQSYYWNAQRHPSWVAAYHMNTIYLQEMMRGNQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagcctcagcggccttagagacggtggaggccgctatgccggcg
gagcgtgtggccgcacagctcgcggcctcggagccaccccccgggccggtgcggagcctg
cggacggctcacgacgtcagcggcccacggacccgcacgggggacgtgctgctggccgag
ccggccgacttcgagtcgctgctgctgtcgcggccggtgctggaggggctgcgggctgcc
ggcttcgagcgaccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctc
gatttaattgtccaagctaaatctggcaccgggaaaacgtgtgtgttctctaccattgct
ttggactctctggttcttgaaaacctaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacagatacattctgttattacagctattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggactccattatcacaagacaaaaccagacttaaaaag
tgccatattgctgttggctctcctggcagaattaaacaactaatagaacttgactacttg
aacccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaactggatttattcttccttgcctgcaagtaaacagatgttg
gccgtatcagccacctaccctgaatatttggctaatgctttgacaaggtacatgagagat
cccacttttgtaagactaaattccagtgatccgagtctcctaggtttgaagcagtattac
agagttgtcaattcataccctttggcccataagatttttgaggaaaaggctcagcattta
caggaactgttcagcagaattccgtttaatcaagccttagtcttttctaatttgcacagc
agagcacaacatttggctgatattctttcttctaaaggctttcctgccgagtgtatttcg
ggtaacatgaatcagaatcagcgtcttgatgctatggccaagctgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgtgggattgatgctgagaaggtgaacctg
gttgtaaatctggatgtaccattggattgggagacatacatgcatcggattggcagagct
ggccgttttggtaccttggggttgacagtgacctactgttgtcggggagaagaagaaaat
gtgatgatgaaaattgcccagaaatgtaacatcaaccttctgcctttaccagatcccatt
cctcctggtctgatggaagaatgttcggattgggatgtggaggttcaagctgctatgcat
acatatggcttagcaagtgtacctacccagcccttaaaaaagcagattcaaaaaatagag
agaacctttccaactccgaaagctcatggtaaccatgtggcttcatccagaaatacttct
gtatctgcactcttagtcaaatcaaaaaataataccaaacaaaagcttcctgtgaaaagc
cactcagagtgtggaatcatcgaaaaagcagtgtcaccgaaagaagtgggctgtggcata
caattggaagagccgatgaagaattctgttcagatctctgttgaaaactcgactggtcag
caccaggtcaaagaagctatacctgtgtcactccctaaaattccttgtctgtcgtccttt
aaaatccatctgccatactctttgactttttcggaattggtagaggattatgaacactat
attaaagaggggttagagaaacctgtggaaatcatcaggcattacacgggtcctggggat
cagactgtcaatcctcaaaatggttttgtaagaaacagaattcctgaagagagagtgcag
gtattggcaagtagcagtcaatctggagactctgagagtgacagtgattcttacagctca
aggacttcttcccagagcaaaggaaataagtcctacttggaaggctcttctgatactcag
ccgaaagatgcggagtctactcgtgtggatggccatatctctttggagcagcctctgaat
ggaaacaacatccctaatccagtagagtatcaggaatcacctgaaatccagacaaaggca
aggcataaagagggggctacccagagagctaagcagagccggagaaaccctcccaggcgg
tcttcctgtcgaatgcagacagaaccccaggaggacggttggtacgactgccacagggaa
acccatctgaatttttccgagacctaccaggactatgaggagtactggagagcttactac
agggcatggcaggaatactacgctgctgcttctcagtcatattattggaatgctcagagg
cacccaagttgggtggcagcttatcacatgaataccatttatctacaagaaatgatgcgt
ggcaaccagtga
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