Puma yagouaroundi (jaguarundi): 121029271
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Entry
121029271 CDS
T07555
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03320
PPAR signaling pathway
pyu04659
Th17 cell differentiation
pyu04919
Thyroid hormone signaling pathway
pyu04920
Adipocytokine signaling pathway
pyu04928
Parathyroid hormone synthesis, secretion and action
pyu05200
Pathways in cancer
pyu05202
Transcriptional misregulation in cancer
pyu05207
Chemical carcinogenesis - receptor activation
pyu05216
Thyroid cancer
pyu05222
Small cell lung cancer
pyu05223
Non-small cell lung cancer
pyu05226
Gastric cancer
pyu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
121029271 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121029271 (RXRB)
03320 PPAR signaling pathway
121029271 (RXRB)
04919 Thyroid hormone signaling pathway
121029271 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
121029271 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121029271 (RXRB)
05202 Transcriptional misregulation in cancer
121029271 (RXRB)
05207 Chemical carcinogenesis - receptor activation
121029271 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
121029271 (RXRB)
05216 Thyroid cancer
121029271 (RXRB)
05222 Small cell lung cancer
121029271 (RXRB)
05223 Non-small cell lung cancer
121029271 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
121029271 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pyu03000
]
121029271 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pyu03310
]
121029271 (RXRB)
Transcription factors [BR:
pyu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121029271 (RXRB)
Nuclear receptors [BR:
pyu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121029271 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121029271
NCBI-ProteinID:
XP_040329106
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPSSPPGLPLPPSAAPTLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQVRGRGSLTASPLSFPCFPCD
PRSLCELPHGPLTFQSSNPGRPVVLVRPLALPEINSTVSLPGGGSGPPEDVKPPVLGVRG
LHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCT
VDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAE
LAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQ
VILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTEL
VSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccaggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctccctcttctcctcct
ggcctacccctacccccttcagcagccccaacccttggaggttccggggccccaccccca
cccccgatgccaccccctccactgggctcccctttcccagtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
gtgagaggtcgtggctcactgactgcctctccactttcatttccttgttttccttgtgac
cccagatccttgtgtgaacttccccatggcccactgaccttccagtcctctaatcctggc
aggcctgtggtccttgtgagaccccttgcccttcctgagattaactcaacagtgtcgctc
cctgggggtgggtctggcccccctgaagatgtgaagccaccagtcttaggggtccggggc
ctgcactgtccaccccctccaggtggccctggggctggtaaacggctatgtgcaatctgc
ggggaccgaagctcaggcaaacactacggggtttacagctgtgagggctgcaaaggcttc
ttcaagcgtaccatccgtaaggacctgacctactcgtgccgggacaacaaggactgcaca
gtggacaagcgccagcgaaaccgctgtcagtactgccgttatcagaagtgcctggccact
ggcatgaagagggaggcggtacaggaggaacgtcagcgggggaaggacaaggacggggat
ggggagggggctgggggagcccccgaggagatgcctgtggacaggatcctggaggcagag
cttgccgtggagcagaagagtgaccagggcgttgagggtcctgggggaaccgggggtagc
ggcagcagcccaaatgaccccgtgactaacatctgtcaggcagctgacaaacagctattc
acgcttgttgagtgggcgaagaggatcccacatttttcttccttgcctctggatgaccag
gtcatattgctacgggcaggctggaacgagctcctcattgcttccttctcccaccgatcc
attgatgtccgagatggcatcctcctcgccacaggtcttcatgtgcaccgcaactcagcc
cattctgcaggcgtgggagccatctttgatcggtccctctccagggtgctgacagagcta
gtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctgagggcaatc
attctgttcaatccagatgccaagggtctctccaaccccagtgaggtggaggttctgagg
gagaaagtgtatgcatcactggagacctactgcaaacagaagtaccctgagcagcaggga
cggtttgccaagctgctgctacgtcttcctgccctcaggtccattggccttaagtgtcta
gaacatctgtttttcttcaagctcattggagacacccccattgacaccttcctcatggag
atgcttgaggctccccaccagctggcctga
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