Puma yagouaroundi (jaguarundi): 121030815
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Entry
121030815 CDS
T07555
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain isoform X1
KO
K19720
collagen type III alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04611
Platelet activation
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121030815 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
121030815 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
121030815 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
121030815 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
121030815 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
121030815 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121030815 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121030815 (COL3A1)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121030815 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
121030815
NCBI-ProteinID:
XP_040331554
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MMSFVQKGTWLLLALLHPTVILAQQEAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDEQELDCPNPEIPFGECCAVCPQPPTAPPRPPNGHGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQFESYDVKSGVVGAGIAGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG
ERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SSGSPGQRGEPGPQGHAGAPGPPGPPGTNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSG
TNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPG
AAGERGAPGFRGPAGANGLPGEKGPAGERGGPGPAGPRGAPGEPGRDGVPGGPGIRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPAGKNGETGPQGPPGPTGPAGDKGDVGPPGPQGLQGLPGTSGPPGENGKPGEPG
PKGEAGSPGTPGGKGDSGAPGERGPPGALGPAGPRGGAGPPGPEGGKGPAGPPGPPGAAG
TPGLQGMPGERGGPGGPGPKGDKGEPGSSGTDGAPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG
VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGNNGNPGPPGPSGTPG
KDGPPGPPGSSGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG
PPGIPGPRGNPGPQGVKGESGKPGSPGHNGERGAPGPQGLPGLAGAAGEPGRDGNPGSDG
LPGRDGAPGGKGDRGENGSPGPPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPAG
SRGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGAPGAPGPAGHQGAVGSPGPAGPRG
PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAG
GGVAFAGIGGEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQIESLISPDGSRKHPAR
NCRDLKFCHPELQSGEYWIDPNQGCKLDAIKVFCNMETGETCINASPVNVPRKNWWIDSG
AEKKHVWFGETMDGGFQFSYGNPDLPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
QASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAVRLP
IVDIAPYDVGGPDQEFGVDIGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggacctggttacttcttgctctgcttcatcccactgtt
attttggcacaacaggaagctgttgatggaggatgctcccatcttggtcagtcctatgcg
gatagagatgtctggaagccagaaccttgccaaatatgcgtctgtgactcaggatctgtt
ctctgcgatgacataatatgtgacgaacaagaattagactgtcccaacccagagatccct
tttggagaatgttgtgcagtttgcccacagcctccaacagctcctcctcgccctcctaat
ggtcatggacctcaaggccctaagggagatccaggccctcctggtattcctgggagaaat
ggtgatcctggtattccaggacagccaggttcccctggttctcctggcccccctggaatc
tgtgaatcatgccctactggtcctcagaactattctccccagtttgaatcatacgatgtc
aagtctggagtagtaggagcaggaattgcaggctaccccgggccagctggtccccctggc
cctcctggtccccctgggacatctggtcatcctggctctccaggttctccaggataccaa
ggtccccctggtgaacctgggcaagctggtcctgcaggccccccaggaccccctggtgct
ataggcccatctggtcctgctggaaaagatggggaatcaggaagacctggacgacctgga
gaacgagggttgcccggacctccaggtatgaagggtccagctggcatgcctggattccct
ggtatgaaaggacatagaggctttgatggacgaaatggagaaaagggtgaaacaggtgct
cctggattaaagggggaaaatggcctgcctggtgaaaacggagctcctggacccatgggt
ccaagaggagctcctggtgaaagaggacggccaggacttcccggagccgcaggggctcga
ggtaatgatggtgctcgcggaagtgatggacaaccaggcccccctggtccccctggaact
gcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcctggt
tcaagtggctcccctggacaaagaggagaaccaggacctcagggacacgctggtgctcca
ggtcctcctggccctcctgggaccaatggtagtcctggtggtaaaggcgaaatgggtcct
gctggcatccctggagctcctggactgataggagcccggggtcctcctggaccatctgga
accaatggtgctcctggacagcgaggtgctgcaggtgaacctggtaaaaacggtgccaaa
ggagagccagggccacgtggtgaacgtggtgaagctggttctccaggtatcccagggcct
aaaggtgaagacggcaaagatggttcgcctggagaacctggtgcaaatggacttccggga
gctgcaggagaaaggggtgctcctgggttccgaggacctgctggagcgaacggccttcca
ggagaaaagggccccgctggggagcgtggtggtccaggccctgcagggcccagaggagct
cctggagaacctggccgagatggtgtccctggaggtccaggaataaggggcatgcctgga
agcccaggaggaccaggcagtgatgggaaaccaggacctcccggaagtcaaggagaaagt
ggccgaccaggtcctccaggcccatctggtccccgaggtcagcctggcgtcatgggtttc
cctggtcctaaaggaaatgatggtgcaccaggcaaaaatggagaacgaggtggtcctgga
ggtcctggccctcagggtcctgctgggaaaaatggtgaaactggacctcagggcccccca
ggacctaccgggccagctggtgacaaaggagatgtaggaccccctggtccacaaggatta
caaggcttaccaggaaccagtggacctccaggagaaaatggaaaacctggagaaccaggt
ccaaagggtgaagctggttcacctggaactccaggaggcaagggtgattccggtgccccc
ggtgaacgtgggccccctggagccttggggcccgctggaccgagaggtggagctggcccc
cctggtcccgaaggaggaaaggggcctgctggtccccctgggccacctggcgctgctggg
actcctggtctgcaagggatgcctggagaaagaggaggtcctggaggccctggtcccaag
ggtgacaagggtgaaccaggcagttcaggtactgatggtgctccagggaaagatggtcca
aggggtcctactggtcccattggtcctcctggcccagctggccagcctggagataagggt
gaaggtggtgcccctggacttccgggtatagctggtcctcgtggtggccccggtgagaga
ggtgaacatgggcctccaggacctgctggcttccctggtgctcctggacagaatggtgag
cccggtgctaaaggagaaagaggtgctcctggtgagaaaggtgaaggaggcccccctgga
gtcgcagggccccccggaggttctgggcccgctggtccccctggtccccagggtgtcaaa
ggtgaacgtggcagtcctggtggtcccggtgctgctggtttccccggtggtcgtggtcct
cctggtcctcctggtaataatgggaacccaggccccccaggccccagcggtactccaggc
aaggatgggcccccgggtccacctggtagcagtggtgctcctggaagccctggagtgtct
ggacccaaaggtgatgctggccagcctggtgagaagggatctcctggcgcccagggcccc
ccgggagctccaggcccacttggcattgcagggattacgggagcgaggggtcttgcagga
ccaccaggcataccaggtcccaggggaaacccaggcccgcagggtgtcaagggtgaaagt
gggaaaccaggatctcctgggcacaatggagaacgtggtgctcctggaccccagggtctt
cctggtctggctggtgcagctggtgaacctggaagggatggaaacccaggatcagatggt
ctgccaggccgagatggagctcctggtggcaagggtgaccgtggagaaaacggctctcct
ggtcctcctggtgctcctggtcatccaggcccacctggccccgtcggtccggctggaaag
aatggtgacagaggagaaaccggccctgctggtccttctggggctccaggtcctgctggc
tcccgaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaacaggtgaacgt
ggttctaatggcatcaaaggacatcgaggattccctggtaatccaggagccccaggtgct
ccaggtcctgctggtcaccaaggtgcagttggtagtccaggacccgcaggccccagagga
cctgttggacccagtgggccccctggcaaagatggaacaagtggacatccaggtcccatt
ggacccccggggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggtcac
ccaggacaaccgggtcctcctggacctcctggtgcccctggtccatgctgtggtgctggt
gggggtgttgccttcgctggtattggaggtgaaaaagctggcggatttgccccatattat
ggagatgaaccaatggatttcaaaatcaacaccgaggagattatgacctcactcaaatca
gtcaatggacagatagagagcctcattagtcctgatgggtcccgtaaacacccggctcgg
aactgccgagacctgaagttctgccatcctgaactccagagtggagaatattggattgat
cctaaccaaggctgcaagttggatgctattaaagtattctgtaatatggaaactggggaa
acatgcataaatgccagtcctgtgaatgttccacgtaagaactggtggatagattctggt
gctgagaagaaacatgtttggtttggagaaaccatggatggtggttttcagtttagctat
ggcaatcctgaccttcctgaagatgtcctcgatgtccagctggcattcctccgacttctc
tccagccgggcctcccaaaacatcacgtatcactgcaagaatagcattgcatacatggat
caggccagtgggaatgtaaagaaagccctgaggctgatgggttcaaatgaaggtgaattc
aaggctgaagggaatagcaaattcacatacacagttctggaggatggttgcactaaacac
actggggaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtgagattacct
attgtagatattgcaccctatgatgttggtggtcctgatcaagaatttggtgtggacatt
ggccccgtttgctttttataa
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integrated database retrieval system
