Puma yagouaroundi (jaguarundi): 121033086
Help
Entry
121033086 CDS
T07555
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pyu04142
Lysosome
pyu04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121033086 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121033086 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
121033086 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pyu02000
]
121033086 (NPC1)
Transporters [BR:
pyu02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
121033086 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
121033086
NCBI-ProteinID:
XP_040335158
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MAAAPHQGSMTARGPALGLLLLLLCPAQVLAQSCIWYGECGIASGDKRYNCKYSGPPKPL
PKDGYDLVQELCPGLFFDNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLVNLFCEL
TCSPRQSQFLNVTATEDYVDPVTNQTKTNVKELQYYIGESFANAMYNACRDVEAPSSNDK
ALGLLCGKDAEACNATNWIEYMFNKDNGQAPFTITPIFSDLPTHGMEPMNNATKGCDESV
DEVTGPCSCQDCSVVCGPKPQPPPPPVPWRILGLDAMYVIMWITYMAFLLVFFGAFFALW
CYRKRYFVSEYTPIDSNIAFSVNANDRGMAWLLTSTLPSSPALPGEASCCDALGAAFEGC
LRRLFSQWGSFCVRNPGPIIFFSLAFIAACSSGLVFVRVTTNPVDLWSAPSSQARLQKEY
FDTHFGPFFRTEQLIIQAPHTSAHTYQPYPSGSDVPFGPPLDLAILHQVLDLQTAIENIT
ASYNNETVTLQDICVAPLSPYNKNCTILSVLNYFQNSHSMLDHEIGDDFFVYADYHTHLL
YCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDT
ERLQKAQVWEKEFINFVKNYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLY
ISIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLV
LAVGVDNIFILVQTYQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKM
PAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVLCCVRGSEDGTSVQASE
SCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMD
YFKSLKYLHAGPPVYFVLEEGHDYTSLKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRI
GFAPSSWIDDYFDWVKPQSSCCRVYNSTDRFCNASVVDPACIRCRPLTQEGKQRPQGGDF
MRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTGVGATYFMTYHTVLQTSADFTDAMR
KANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLGAIFLVTVIL
LGCDLWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFT
VSMKGSRAQRAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLG
ATHGLIFLPVLLSYIGPSINKAKSLATQEQYKGTEREQLLNF
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcaccgcaccaaggcagcatgaccgcgcgcggcccagccctcggcctcctc
ctgctgctgctgtgtcccgcgcaggtgttggcacagtcttgcatctggtatggagagtgt
ggaattgcatctggagataagaggtacaactgcaaatattcagggccaccaaaacccttg
ccgaaggatgggtatgacttagtgcaggagctctgtccaggactcttctttgacaatgtc
agtctttgttgcgatgtgcagcagcttcggacactgaaagacaacctgcagctgcctcta
cagtttctgtccagatgtccatcctgtttctataacctagtgaacctgttttgtgagctg
acgtgtagccctcggcaaagtcagtttctgaatgttacagcaactgaagattatgttgat
cctgttacaaaccagactaaaacaaatgtaaaagaattacagtactacattggagagagt
tttgccaatgccatgtacaatgcctgccgggacgtggaggccccctccagtaatgacaaa
gccctgggactgctgtgtgggaaggacgccgaagcctgcaatgccactaactggattgag
tacatgttcaataaggacaacggccaggcacctttcaccatcacacccattttttcagat
cttccaacccatgggatggagcccatgaacaatgccaccaagggctgtgacgagtctgtg
gacgaggtcaccgggccgtgcagctgccaggactgctcagttgtttgtggcccaaagccc
cagcccccaccgcctcctgtgccctggagaatcttgggcctggacgccatgtatgtcatc
atgtggatcacctacatggcatttttgcttgtgttttttggagcattttttgctttgtgg
tgctacagaaaacgctattttgtctctgagtacacccccattgatagcaacatagctttc
tctgtaaatgccaatgacagaggaatggcttggctcttaacctccaccctcccttcctct
cccgctcttccaggggaggcgtcctgctgtgacgcgcttggtgcggcatttgagggctgt
ctgaggcggctcttctcacagtggggctctttctgcgtccgaaacccgggccccatcatc
ttcttctccctggccttcattgccgcctgttcttcaggcctggtgtttgtgcgggtcacg
accaatccagttgacctgtggtcagctcccagcagccaggcgcgcctccagaaagagtac
tttgacacgcactttgggcctttcttccgcacggagcagctcatcatccaggccccccac
accagtgcacacacttaccagccgtacccctcaggatccgatgtgcccttcggacctccg
cttgacctcgcgatcttgcaccaggttcttgacttacaaactgccatcgaaaatatcact
gcatcttataacaatgagaccgtgacacttcaagacatctgcgtggcccccttgtcaccc
tataacaagaactgcaccattctgagcgtgttaaattacttccagaacagccattccatg
ctggaccatgaaataggagatgacttctttgtgtatgcagattaccacacgcacttgcta
tactgtgtacgggctcctgcctctctgaacgataccagtttgctccatgatccttgcctg
ggtacattcggtgggccagtgttcccgtggcttgtgttaggaggctatgatgatcaaaat
tacaataatgccacagcccttgtgattacctttcctgtcaataattactataatgataca
gagaggctccagaaggcccaggtctgggaaaaagagtttattaattttgtgaaaaactac
aagaatccaaatctgaccatttctttcactactgagcgaagtattgaagatgaactaaat
cgtgaaagtaacggtgatattttcactgttataatcagctatgccatcatgtttctgtac
atttccatagccttggggcacatcaaaagctgtagcaggcttctagtggactctaaaatc
tccctcggcatcgcggggatcctcattgtgttgagctcagtggcgtgctcgttgggcatc
tttagctacattgggatccctctcaccctcattgtgatcgaagtcatcccattcctggtg
ctggctgttggggtggacaacatcttcattctggtccagacctaccagcgagatgaacgt
cttcacggagaaactctggatcagcagctgggcagggtcctaggagaagtggctcctagt
atgttcctgtcatccttttcagaggctgtagcatttttcttaggagcactgtcaaagatg
ccggctgttcacaccttctctctgtttgccgggatggcagtcctcatcgacttccttctt
cagattacctgtttcgtgagtctcttggggttagacattaagcgtcaagagaaaaaccgt
ctggatgttctttgctgtgtcagaggctctgaagatggaaccagtgtccaggcttcagag
agctgcttgtttcggctcttcaagcactcctattctccacttctgcttaaggattggatg
agaccgattgtgatagcgatatttgtgggtgtcctgtcattcagtgttgcagtcctgaac
aaagtggaaatcggattggatcagtctctttcaatgccagatgactcctacgtgatggat
tatttcaagtccctcaaatacctgcatgcaggtccacctgtgtactttgtcctggaggaa
gggcatgactacacctctctgaaagggcagaacatggtgtgcggaggcatgggctgcaat
aacgactccctggtgcagcagatcttcaacgcggcccagctagacagctatacccgaata
ggctttgctccctcttcctggatcgacgattactttgattgggtcaagcctcagtcttct
tgctgtagagtctacaacagcaccgaccggttctgcaatgcttcagtggttgaccctgcc
tgcatccgctgcaggcccctcacccaggagggcaaacagaggcctcaaggtggagacttc
atgagattcctgcccatgttcctttctgataacccaaaccccaagtgcggcaaaggggga
catgctgcttacagttcggcagttaacatcctcggcaatgacacgggtgtcggagccact
tacttcatgacctaccacaccgtgcttcagacgtctgctgactttactgacgccatgaga
aaagccaacctcatcgccagtaacatcaccaaaaccatgggccttgaagggagtaattac
cgtgtgttcccatacagtgtattctatgtcttctacgaacagtacctgaccattattgat
gacacgatctttaacctcagcgtgtccctgggagccatcttcttggtgaccgtgattctc
ctgggctgtgatctgtggtctgcagtgatcatgtgtatcaccatcgctatgatcttggtc
aacatgtttggcgtcatgtggctgtggggcatcagtctgaatgcagtttccttggtcaac
ttggttatgagctgtggcatttccgtggagttctgcagccacataacaagagcattcaca
gtgagcatgaagggcagccgtgcacaacgggcagaagaggcgctcgctcacatgggcagt
tctgtgttcagtggaatcacactaacaaaatttggagggattgtggtattggcctttgcc
aaatctcagattttccagatattttacttcaggatgtatttggctatggtcttactggga
gccacccacggcttgatcttcctcccggtcttactcagctacataggcccatcaataaat
aaagccaaaagcttggccactcaagagcaatacaaaggtacagagcgagaacaactccta
aatttctag
DBGET
integrated database retrieval system
