Puma yagouaroundi (jaguarundi): 121033475
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Entry
121033475 CDS
T07555
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pyu04040
]
121033475 (SCN10A)
Ion channels [BR:
pyu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121033475 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
GPHH
CcmD_alt
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
121033475
NCBI-ProteinID:
XP_040335760
LinkDB
All DBs
Position
Unknown
AA seq
1966 aa
AA seq
DB search
MAFPFGSLETTNFRRFTPESLVEIEKRITAKQAAKKAKDKHREQKDQEEKPRPQLDLKAC
NQLPKFYGDLPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVGMTQTELPERIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYIGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCTALNKTGNYSSYGKHEW
NFCQEDEDFYYNKPGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALEMLRKEQEVLAALGIDTASLHSHNGSPLASKTASERMPRMKPRVSE
GSTDDSKSPQSDPYNQRRMSFLGLTSGRRRASHGSVFHFRAPCLDASFPDGATDDGVFPG
DRDSRRGSLLLGGGAGQQGPLPRSPLPQPSNPGSGLGEDGHSTLPTGELAPGGIEVSAFE
AGQKKAFLSAEYLNEPFRAQRAMSVVSIMTSVLEEFEESERRCPPCLTSLAKKYLIWECC
PTWVKLKTLLFGIVTDPFAELTITLCIVVNTVFMAMEHHRMSPAFEAMLQIGNIVFTVFF
TAEMVFKIIAFDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAK
SWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHNISAPNEEWP
RWHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIAL
LLNSFSADNLTAPDEDGEVNNLQMALARIQAFGHRTRKALCSFFSRPRLLPWPKAEPQLA
VKLPLSSAKAENHIAPDVATGSPEGLPEPRGPRVSHSDFITNPSIWVSVPIAEGESDLDD
LEEDGEEDGEEDGEEDGAQGSQQEQVGRYEDHMAPRSPGSGMSSEDLAPHLGEKWKDESA
ARGPAEGVDDTSSSEGSTVDCLDPEEILKKIPELADDLEEPDDCFTEGCIRHCPCCKVDA
SKFPWAVGWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTD
RVFTFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKALR
TLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFGRC
VNKTNENLSLVPLSIVNNMSDCKDQNHTGSFFWVNMKVNFDNVAMGYLALLQVATFKGWM
DIMYAAVDSRDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDVVTRQAFDIIIMVLICLNM
ITMMVETDDQSEEKTKILNKVNQFFVAVFTGECVMKVFALRHYYFTNGWNVFDFIVVVLS
IGSLVFSAILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYSIFGMASFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPI
LNTGPPYCDPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQ
ESSEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQNILIQMDL
PLVPGDKIHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKASYEPIATTLRWKQ
EDISATVIQKAYRSYVLHRSKTISSPPGVPRAEEEAVSPPDEAFVGFMANENCALPDKSE
SVSAVSFPPSYDSVTRGLSDQVNMSTSSSMQNEDEATSKKATAPGP
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccctttgggtccctggaaactaccaacttccgtcgattcactccagagtcc
ctggtggagattgaaaagcgaattactgccaagcaggcagcaaagaaagccaaagataag
cacagagagcagaaggaccaagaagagaagcctcggccccagctagacttgaaagcttgc
aaccagctgcccaagttctatggtgatctccctgcagagctggttggggagcccctggag
gatctggaccccttctacagcacacaccggacgtttatggtgctgaacaaagggaggacc
atttctcggtttagtgcaactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
gtcactattttggtcaattgtgtgggcatgacccaaaccgagcttccagagagaattgag
tatgtcttcactgtcatttatacctttgaagccttgataaagattctggcaagaggattt
tgtctaaatgagtttgcttacctgcgagatccttggaactggttggattttagcgtcatt
accctggcatacattggcgaagcgatagatctccgagggatctcaggcctgcggacattc
agagttcttagagccttaaagacagtttctgtgatcccggggctgaaggtcattgtggga
gccctgatccactcggtgaagaaactggcggatgtgaccatcctcaccgtcttctgcttg
agtgtctttgccttggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgtaccgctctcaataagacaggcaattactcctcttatggaaaacacgagtgg
aacttctgccaagaggatgaagatttctactacaataagccaggcacttcagatccctta
ctgtgcggcaatggatctgatgcaggccattgccctgaaggttatttctgtcttaaaaca
tctgacaacccagattttaactacaccagcttcgactcctttgcttgggctttcctgtca
ctgttccgcctcatgacacaggattcctgggaacgcctctaccagcagacgctgagggct
tctgggaaaatgtatatggtctttttcgtgctggtcatctttctggggtctttctacctg
gtcaacttgatcttggctgtggtcaccatggcatatgaagagcagaaccaggccaccatt
gatgaaattgaagccaaggagaaaaagttccaggaggccctcgagatgctccggaaggag
caggaggtgctggcagcactggggattgacacagcttctctccattcccacaatggatca
cctttagcctccaaaactgccagtgagagaatgcccaggatgaagccgagggtgtcagag
ggctccacagatgacagcaaatcaccccaatctgatccttacaaccaacgcaggatgtct
ttcctaggtctcacctctgggaggcgccgggctagccacggcagtgtgttccatttccgg
gccccttgcctggatgcctcattccctgatggggccacagatgatggagtctttcctgga
gaccgtgacagccgtcggggctccttgctgctgggtgggggtgccggccagcaaggcccc
ctccctaggagtccgctgcctcagccctccaaccctggctcaggacttggagaagacgga
cactccacattgcccaccggtgagcttgctcctggaggcatcgaagtctcggcatttgag
gcaggacagaagaaggctttcttatcagcagaatacctgaatgaacctttccgagcccaa
agggcaatgagtgttgtcagcatcatgacctctgtccttgaggaattcgaggagtctgaa
cggaggtgcccaccctgcttgaccagcttggctaagaagtatctgatctgggaatgttgc
cccacatgggtgaagctcaagacacttctctttgggatagtgacagacccctttgcggag
ctcaccatcaccttgtgcatcgtggtgaacacagtcttcatggccatggagcatcaccgc
atgagccccgccttcgaagccatgctccagataggcaacattgtctttactgtgtttttt
actgctgaaatggtcttcaaaatcattgccttcgacccctactattacttccagaagaga
tggaacatctttgactgcatcatcgtcaccgtgagcctgatagagctgggtgcggccaag
aagggaagcctgtcagtgctgcggaccttccgcttgctgcgggtcttcaagcttgccaag
tcctggccaaccttaaacacgctcatcaagatcattgggaactcagtgggggcgctgggg
aacctcaccatcatcctggccatcattgtctttgtcttcgctctggttggcaagcagctc
ctcggggataactaccgtgacaaccggcacaatatctctgcgcccaacgaagaatggcca
cgctggcacatgcacgacttcttccactccttcctcatcgtcttccggatcctgtgtgga
gagtggattgagaatatgtgggcctgcatggaagttggccagaaatccatatgcctcatc
cttttcttaacagtgatggtgctcgggaacctggtggtgctcaatctgttcattgccctg
ctgttgaactccttcagcgctgacaacctcacagctccagatgaagacggggaagtgaac
aacctgcagatggccctggcacggatccaggcatttggccatcgtacccggaaagccctc
tgcagcttcttcagcaggccccgcctgctaccctggcccaaggcagagccccagctggcg
gtgaaactcccactgtctagtgccaaagctgagaaccacattgctcccgatgtagccacg
gggagccccgaagggctcccagagccccgaggccccagggtcagccacagcgacttcatc
accaatcccagcatatgggtctctgtgcccattgctgagggtgaatctgaccttgatgac
ttggaggaagatggtgaggaggatggtgaagaggatggtgaggaggatggtgctcagggc
tcccagcaggaacaagttgggagatacgaggaccacatggcacccaggagcccaggctct
ggaatgtcctctgaggacctcgctccacacctgggtgagaagtggaaagatgagtctgcc
gcccggggccccgcagagggggtggacgacacgagctcctcagagggcagcacagtggac
tgcctggatccggaggagatcctgaagaagatccccgagctggcggatgacctcgaagag
ccagatgactgcttcacggaaggctgcattcgccactgtccctgctgcaaagtggacgcc
agcaagtttccatgggccgtgggctggcaggtgcgcaaggcctgctatcgcatcgtggag
cacagctggttcgagagcttcatcatcttcatgatcctgctgagcagcgggtctctggcc
tttgaagactattaccttgaccagaagcccacggtgaaggccttgctggaatatactgac
agggtgttcacatttatctttgtgttcgaaatgctgctcaagtgggtggcctacggcttc
aagaagtacttcaccaacgcctggtgctggctggacttcctcattgtgaacatctccctg
acaagtcttatagcgaagatcctgcagtattctgatgtggcatccatcaaagcccttcga
accctccgtgccctgcggcccctgcgggctctgtctcgatttgaaggcatgcgggtggtg
gtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtgaacttctttgctgggaagtttgggcggtgc
gtcaacaaaaccaatgaaaacctttctcttgtgcctttatctatcgtgaataacatgtct
gactgtaaagatcagaaccacactggcagcttcttctgggtcaacatgaaggtcaacttc
gataatgttgcaatgggttacctcgcccttctgcaggtggcaacctttaaaggctggatg
gacatcatgtatgcagctgttgattcccgagatgtgaacttgcagcccaagtgggaggac
aatgtatacatgtacttgtacttcgtcatcttcatcattttcggtggcttcttcacactc
aatctcttcgttggggtcataattgacaacttcaatcaacagaaaaaaaagttagggggc
caggacatcttcatgacagaggagcaaaagaagtactataatgccatgaagaagctgggc
tccaagaagccccagaagcccatccctcggcccctgaacaagtaccagggctttgtcttt
gacgttgtgaccagacaagcttttgacatcatcatcatggtcctcatctgcctcaatatg
atcaccatgatggtggagactgatgaccagagtgaagaaaagacaaaaatcctcaataaa
gtcaaccagttctttgtggctgtcttcacgggagagtgtgtcatgaaggtgttcgcctta
cggcattactacttcaccaatggctggaatgtgtttgacttcattgtcgtggtcctctcc
attgggagcctggtattttctgcgattctgacgtcactcgaaaattacttctccccaaca
ctattccgagtcatccgcctggcccgaatcggccgcatcctcaggctgatccgagcagcc
aaggggatccgcacgctgctctttgccctcatgatgtccctgcctgccctcttcaacata
gggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccagcttcccc
catgtaaggtgggaggctggcatcgacgacatgttcaacttccagaccttcgccaacagc
atgctgtgcctcttccagatcaccacgtcggccggctgggacggcctcctcagccccatc
ctcaacacagggcccccctactgcgaccccaatctgcccaacagcaacggctcccggggg
aactgtgggagcccggccgtgggcatcctcttcttcaccacctacatcatcatctccttt
ctcattgtggtcaacatgtacatcgcagtgattctggagaacttcaatgtggccacacag
gagagcagtgaacctctgagtgaggatgactttgacatgttttatgagacctgggagaag
tttgacccggaagccactcagtttattaccttttctgccctctcggactttgcagacacc
ctctctggccccctgcgaatcccaaaacccaatcagaatatattaatccagatggacctg
cccttggtccctggagataagatccactgtttggacattctttttgccttcactaagaat
gttctgggagaatctggggagttggattctctgaaggcaaacattgaagagaagtttatg
gcaactaatgtttcaaaagcatcttatgaaccaatagcaaccaccctccggtggaagcaa
gaagacatttcggctactgtcattcaaaaggcctatcggagctatgtgctgcaccgctcc
aagacaatctccagccctccaggtgtgcccagggctgaggaggaggctgtgtcaccccca
gatgaagcctttgttggattcatggcaaatgaaaactgtgccctcccagacaaatctgaa
agtgtgtctgctgtatctttcccaccatcctatgacagtgtcactagaggccttagtgat
caagtcaacatgagcacatccagctcaatgcagaatgaagatgaagctaccagtaagaaa
gcaactgcccctgggccctag
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