Puma yagouaroundi (jaguarundi): 121034515
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Entry
121034515 CDS
T07555
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
pyu
Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121034515 (FOCAD)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121034515 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
121034515
NCBI-ProteinID:
XP_040337299
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKESGFSEKIHQSTDQTPALNLLWEKCCGDNA
VVRTACCEALVALVAQDHAEFSYVLNGILNLIPSTRNTHGLLKAIMKLLQMQALKEGQGG
EKNIQNLYTIRNRPQPLITVLEHRPDCWPVLLQQLTAFFQRCPERSEVSCIQIMAPFLWY
LYCEPSQLEEYAKLRLTLLKVLLQPRVPGDTEQPSTLEQQILQLCCDMVPCLQVKDLVQT
TEVMTFIEEVYLSLLRHPIFWKIQLSQLTLQLLCVCEVSLKITGECSSLIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILSLALKLVSFAEGQKIPKASLVLVMPLLQILS
STALEDCMSTDEEGPSRQQLAVNLLEIVQQESCRDDRRKLSYKLAFPITGMYGSIFTAWR
ILEVMREKSAASDWLFSVESLLPITTVIPAHVFLVLAHLLVEDQGQNLRQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPHLR
AVTVRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKESIVANAAYKSLSHFSAG
EHTVLHLPEEIRPEIPIPDELEEDEDDEGDEKDLDLSIPGSCYLKLLSLTAPLVFPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDISTYQSKEGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAY
MSRAYHAILQGRIGELDLQLKHGKEGPEEVQYKKGTAWLWVRDMLTDEITKTAVKESPVV
KGNALLALSSLAVVVSRHEASLSSDSEGVPEVHPNFLSMKEWVSMVSDTLLVIVDSHHQP
RGQIFSSFYYKSYSGENTASAIARSAAATALSLLVQVFIISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDASLEYN
TGCILGVGLVLSVMSHSSRMESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSAGIIEATEAEDIMNKLQLLVENNQQTSGFALALGNLVHGLSVCGHGKAEDLGHRLL
PAWIRIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKAEAIQTSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAIGFFITGGK
KGPESVPPSLLKVVMKPIAAVGESYQFPPVSWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNAAALLGLWVMPPLIHSLSLNVKKYLLVSTPLWIKHVSDEQMAGFVENLMVAVFKT
ASPLPNPELCMSALQGLSQAMKLPSPAHHLWSLLCEATGKIFDLLPKKIRRNDLELYISV
AKCLSEMTDDEANRVAQITESSVEKAAFVRLYLVSQGRFPLTGLTDILSVAIQHREKDTL
AWMVLHGLYQARIVSHANTGVLKRMEWLLELMGYIRNLAYQSTSVQNVALDEALDFLLLI
FAIAVVAWADHAAPLLLGLSASWLPWHQENGPAGSVSSFLGRSPMHRVTLQETLTLLPSS
MPILLQKEPWKEQTQKFIDWLFSIMESPKEGLSAKSRDLLKATLLSLRILPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatctcattgctgccgtcctaaaggaaagtggtttttcagaaaagatccaccaa
tccacagaccagactccggctttgaacttgctgtgggagaagtgttgcggtgataatgcg
gtggttcgaacggcctgctgcgaggctctggtggcactcgtcgcccaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccgtcgaccaggaatacacatggc
ttgctaaaagccattatgaagttattgcaaatgcaagctctaaaggaaggacaaggtggg
gagaagaatattcagaatttatatactataagaaatcgtcctcagcctttgatcactgtg
cttgaacatagacctgattgctggccagtacttttgcagcagctgacggcttttttccag
cgatgtcctgaaaggtcagaagtctcatgcatccaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttagaagaatatgctaaactccgactaaccctgctgaaa
gtcttacttcagccccgggttcctggtgacacagaacagccatcaacattggaacaacag
atacttcaactgtgctgtgatatggttccatgtctgcaggtaaaagatttggtccagaca
acagaagtgatgacgtttattgaagaagtatatttaagccttctgcgtcatcccattttc
tggaaaattcagcttagccagctgacccttcagctcttgtgtgtctgtgaagtcagctta
aagataactggggaatgctcctcgttaattcaccttttagaacacagcgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactgcttctacagact
ccagcaagtcagcagaagccgatcttaagtctggctctgaagctcgtctcttttgctgag
ggtcagaaaatcccaaaggcctccttggtgctggtgatgccccttctgcagatcctgtct
tctactgccttggaagactgtatgtccacggacgaagaaggtccctctaggcagcagttg
gctgtaaaccttttggaaatagtacagcaggaatcctgcagagacgaccgccggaagctc
tcctacaagcttgcgttccccataaccggcatgtatggatcaatatttacagcctggagg
atcctcgaagtaatgagagaaaagtctgctgcaagtgactggttgttttctgtagagtcc
ttgctccctataaccacagtaatccctgcgcatgtttttcttgtgttggctcacctcctt
gttgaagatcaaggacaaaatcttcgccaaatactgaaggtcactacagaattggcccaa
gcagattcctctcaggtaccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctgtattatataatgatatcttgtatactttgcctacacttggtgttcacaag
gtgtgcataggacaaattctacgagtgatccaacttcttggaactactccacacctaaga
gctgtcactgtgcgcttgttgacatctttgtgggaaaagcaggatcgtgtatatcctgaa
ctgcagcgtttcatggccatgtctgacgtgccttctctgtctgtgggcaaggaagtccag
tgggagaaactcatcgctaaagcagcatcgataagagacatatgtaagcaaaggccctat
cagcatggagcagacatgttggcagccatttcccaggtgttgaatgagtgcaccaaacct
gaccaagccactccagcagccttggtgctacaaggtcttcatgccctctgccaagctgag
gttgtttgcattcgctccacgtggaatgctctctccccgaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttctctctggttccttccttgacagtcaat
acagctgaatatgagaattttaaagtccaagtcctcagcttcctctggacccacactcaa
aacaaggaatcaattgtagcaaacgctgcctataaatctctgtcacattttagcgcggga
gagcataccgttcttcatctgcctgaagagataagaccggaaatccctattcctgatgag
ctagaagaagatgaagatgatgagggtgatgaaaaggatctggatctttccatccctggc
tcttgctatctcaaactactgtcacttactgctcctttggtttttccagctttggaggaa
ttttttacatctcttgtgaagcaagaaatggtgaatatgccccgtggagtatatcactct
gcattaaaaggaggtgttcgctcagaccaaggaaagaccgtagcaggaatccccaatttt
atattgaaaatgtatgaaacaaacaagcaaccgggtttgaaacctggccttgcaggtggt
atgttattttgttatgatatttcaacgtaccagagtaaagaaggcaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcgcttgctcttgtgcatgaggtt
cacatccagctttctgagtggcaccgtgcgattttcctgccacaggcctggcttgcgtat
atgagtcgagcctaccatgccattttacagggcagaataggagaactggatttgcagttg
aaacatgggaaggaaggacccgaggaggtgcagtacaaaaaaggcacagcctggctctgg
gtccgagacatgttgactgatgagatcaccaagacggctgtgaaggagagcccagtggtc
aagggcaacgcgctgttagccttaagcagccttgctgtcgtcgtatccagacacgaagcc
agcctctcctccgactctgagggggtcccggaggttcatcctaatttcctttcaatgaaa
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccatcaccaaccc
agaggacaaatcttctcctcattttattataaatcctattctggtgaaaacacagccagt
gccattgcccgctcggctgccgccacggctttgtctctcctcgtgcaagttttcattatc
tcttgcaaagagaaggttgaggaaatcctcaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcaaatccacatgggccttgctttggggatgttt
ctgtcccgcttgtgtgaggagaaactcagtgatatatctggccaacagatgaacctcctt
ctgatgaagtctttggatgccctggaaaattgctgctttgatgctagtcttgaatataac
acgggctgtatattgggagttggacttgttctgtccgtcatgagccacagcagccgaatg
gagtctcgagttcatgtggcagcatcgcttcggaagctgtctacctacctggatgacagt
gggagccaaagcagaacatttcaggaggtccttgcctataccctcagctgtgtatgcaca
tcagcattcagtgccggaatcattgaggctaccgaggctgaagatatcatgaacaagctt
cagctgttggtagaaaacaaccaacagacgtcaggttttgccctagcgttaggaaacctg
gttcacggattgtctgtgtgtggacacggaaaagcggaggacttgggccaccggctgctc
cctgcctggatcagaattgttctgacagagggcactccgacaatgctctgtcttgcagct
cttcatggcatggtggccttggtgggctctgaaggggatgtaatgcagctgaaggcagaa
gccatccagacctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagcgtgtctggagtgattggtcttcagtcaaatgcgctctggcttctgggccat
cttcatctgtctactctgtcctcgagtcaaagtaggacctccgttcctaccgactatagc
tatttgcccgagagcagttttattagagcagccattggcttcttcattacaggaggaaaa
aaaggtcctgagtctgtgcctccttcccttctcaaagtcgtgatgaaacccatcgcagct
gttggagagagctaccagttcccccccgtgagctgggccgcgctcctctcgccactcatg
aggctaaacttcggagaagaaatacagcagctgtgcctggaaattatggtgacgcaggcg
caatcatcccagaatgcagctgcgctgttgggactgtgggtgatgccaccactgatccat
agtctgagtttgaacgtcaagaaatacctcctggtttctacacctctgtggataaaacac
gtctcagacgaacagatggcgggttttgttgaaaacttaatggtggcggtgtttaaaacg
gcttccccacttcccaatcccgagttatgcatgagtgccttacagggcctgagtcaggcc
atgaaactgcccagccctgcccaccacctctggagtctgctctgcgaagccaccgggaag
atttttgaccttctgccaaagaagattcggagaaatgatctagagctatatatcagcgta
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgagttgcccagattactgag
agcagcgtagaaaaggctgcctttgtcagactgtacttggtctctcaaggacgattcccc
ttgacgggcttgactgatatactcagcgttgctattcagcaccgtgaaaaagacacacta
gcttggatggtactgcacggtttataccaagcccggattgtgagccatgccaacacaggc
gtgttgaagagaatggaatggctcttggaactgatgggttacatcagaaaccttgcatac
cagtctacctctgttcagaacgtggctcttgacgaggctttggacttcttgttgctgata
tttgcaatcgcagtggttgcatgggcagaccacgcggcccctctcctccttggccttagt
gccagttggttgccatggcatcaggaaaatggcccagctgggtcagtttcgagcttcctt
ggcaggagtccaatgcacagggtcactctgcaggagactctcactctccttcccagtagc
atgcctattctgctgcagaaagagccatggaaggaacagacccagaagttcattgactgg
ctcttcagcatcatggaaagccccaaagaaggcctctcagccaaatccagggatcttttg
aaagccaccctgctgtccttgagaattctcccagagtttaagaagaaagccgtatggacc
agagcgtatggttggtga
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integrated database retrieval system
