Herpailurus yagouaroundi (jaguarundi): 121034955
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Entry
121034955 CDS
T07555
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pyu03000
]
121034955 (RC3H2)
04121 Ubiquitin system [BR:
pyu04121
]
121034955 (RC3H2)
Transcription factors [BR:
pyu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121034955 (RC3H2)
Ubiquitin system [BR:
pyu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121034955 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121034955
NCBI-ProteinID:
XP_040338169
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSAFITRVPVYPQHSENIQYFQ
DPRTPIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTSVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDASDTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFNQ
PLPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtctgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgactctcgtaaactgt
cagctggtggaggaagaaggtcgtgtaagagccatgcgagcagcccgttcgcttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaactgtctgccaaccta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctcgcattagaagatggttctgctctctcaaggaaagtactggta
ctttttgttgttcaaagactagaaccaagatttcctcaggcatctaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgttttaaagttaccaaaagggatgaagac
tcttccttgatgcagctaaaggaggaatttcggagttatgaagcattacgcagagaacat
gatgctcaaattgttcacattgctatggaagcaggactccgcatttcacctgagcagtgg
tcctcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatctgcgt
cagcaaggagggtgtccccgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtactttaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaacgcaactgggccttctgcagag
tctgtaactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
gcatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactccgatacccttcgaagtcccacagtacccccagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgagatccaat
aatgttccagaatcctccctcccacctgcttctatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttccgccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagtaattctttacctccaatg
gatgtgatgcactcgtctgtttatcagacgtctttgcgggaaagatataactcattagat
gggtactattcagtggcttgccagccaccaagtgagccaaggacaagtgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gagagtgtgagtggtacaaagtttgaagaagatcatctttctcattattctccttggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtattaatggacctggacagtggagatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagacccaataattccatttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttcacgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat
gttccttatgtcaatgctgttgattcaaggtggagttcatatggtaacgaggccacgtca
tcagcacactatattgaacgggacagattcattgttactgatttatctggtcatcgaaag
cattccagtactggagaccttttgagtattgaacttcagcaggccaagagtaactcattg
cttcttcagagggaggccaatgcactggccatgcagcagaagtggaattccctggatgaa
ggccgccaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacagaagatgcaagcgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgatggacaaggtgaacaaattgaagagatcctggacata
cagctgggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg
catccagtccaacagcaccaaaaggagccactggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttaaccag
ccactcccagtgtccattagcaatgcaagttgcctccccatcaccacatctgtcagtgtt
ggcaacctcattctgaaaactcacgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
