Herpailurus yagouaroundi (jaguarundi): 121035845
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Entry
121035845 CDS
T07555
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121035845 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyu04147
]
121035845 (COL18A1)
00535 Proteoglycans [BR:
pyu00535
]
121035845 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121035845 (COL18A1)
Exosome [BR:
pyu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121035845 (COL18A1)
Proteoglycans [BR:
pyu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
121035845 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121035845 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121035845
NCBI-ProteinID:
XP_040339660
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MAPRWPWLRPRPRSLLDVLAPLVLLLGVRAASADPESLGTEVGLLQLLGEPPPQQVAQVD
DPDVGPAFVFGPDANSGQVARYHFPSPFFRDFSLLFHVRPATEGAGVLFAITDAAQAVVS
VGVKLSAVRDGQQHIQLLYTEPGATRTRTAASFRLPAFTGQWTRFALSVDGATVALFVDC
ELFQRVPLVRSPRALELEPGAGLFVAQAGGADPSKFQGRIAELRVRGDPRVSPLHCLEED
DEDSGGVSGDFGSGLEENRELLREQSGPSPKPSLPEAPPVTSPPLAGGRNVEDSRTEEIE
EETTMSSLGAWTLPGSDTVTAWSVRSPGGGPEEGPAGSAVQSPDAQPVPGPQGPPGPPGP
PGKDGAPGKDGEPGDPGEDGKPGDPGPQGFPGTPGDMGPKGEKGDPGVGPRGPPGPQGPP
GPPGPSFRHDRLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSSD
VPGPAGLPGVPGRDGAPGLPGAPGPQGPPGRDGGPGKTGQKGSPGEAGAPGPKGSKGDPG
PTGAPGETGLAGAPGPAGPPGPPGPPGPPGPGLAAGFEDMDGSGGPFWSTAHGASGPQGP
PGLPGVKGDPGIAGPPGAKGEVGADGPPGFPGLPGREGTAGAQGPKGEKGTQGEKGDPGR
DGVGQPGLPGPPGPPGPVVYVSEQDRAVAGVPGPEGRPGYAGFPGPAGPKGDLGSKGQRG
PPGPKGEKGEPGPVFSPDGGMLGPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRP
GMNGLKGEKGEPGHASVGFGVRGPPGPPGPPGPPGPPGTPVYDSNAFMESGRPGPPGLPG
YQGPPGPKGDKGEVGPPGPPGQFPLDLLQLEAEMKGEKGDRGDPGQKGERGEPGGGGFFG
SSVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGPPGPPS
FPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLDKVPEVPEGWLIFVAE
TEELYVRVRNGFRKVLLEARTPLPRGTDNEVAALQPPLVQLHEGNPYPRRELTHSTARPW
RADDILAGPPRLPDPRPYPGAPHHGPYLRVQPARPTGGPARTHTHQDFQPVLHLVALNSP
QPGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRTGVPIVNLRDEV
LFPSWEALFSGSEGQLKPGARVFSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTDSYCETW
RTEDAAAAGQASSLLAGRLLAQKAASCRNAFIVLCIENSFMTSSSK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaggtggccctggctgcggccgcggccgcggagcctcctggacgtgctcgcc
cccctggtcctgctgctcggggtccgcgcggcctccgcggacccagagagcctgggcacg
gaggtggggctcctgcagctgctcggagagccgccgccccagcaggtcgcccaggtggac
gaccctgacgtcgggccggccttcgtcttcggcccggatgccaacagcggccaggtggcc
cggtaccacttccccagcccgttcttccgcgacttctcactgctcttccacgtccggccc
gccaccgagggcgccggggtgctgttcgccatcacggacgcggcccaggcggtggtctcc
gtgggcgtgaagctgtcggccgtgcgtgacgggcagcagcacatccagctcctgtacacc
gagcccggcgccacccgcacccgcacggccgccagcttccgcctgcccgccttcaccggc
cagtggacgcgcttcgcgctcagcgtggatggcgcgaccgtggcgctgttcgtggactgc
gagctgttccagagggtgcccttggtgcgctccccgcgggccctggagctggagcccggc
gccggcctcttcgtggcccaggctggaggagcagaccccagcaagttccagggaaggatc
gcggagctgagggtgcgcggagacccccgggtgagccccctgcactgtctggaggaggac
gacgaggacagtggtggggtgtctggagacttcgggagcgggctggaggagaaccgggag
cttctcagggagcagtcgggtccgtccccaaagcccagcctccctgaggctccaccagtc
acttctccgcccttggctggaggcaggaatgtggaagattccagaactgaagaaattgag
gaagaaaccacgatgtcttcgttgggagcttggaccctccccggctcagacaccgtcacc
gcatggagcgttcggagccctgggggcggcccggaagagggtcctgcaggctctgcagtg
cagagccccgatgcacagcctgtacccgggccacagggccccccgggccccccagggcca
ccggggaaggacggtgctcctggaaaggacggtgagccgggcgatcctggagaagacggg
aaacctggtgaccctgggccacagggcttccccgggaccccaggagacatgggccccaag
ggcgagaagggggaccctggggtcgggccaagaggacccccaggaccccaagggcctccg
gggccaccaggaccctccttcagacatgacaggctgaccttcattgacatggaggggtcc
gggttcggcggtgacctggagagtctccgaggcccgagaggcttccctggccccccgggg
ccccccggcgtcccaggcctgcccggagagccaggccgctttgggatgaacagctccgac
gtcccaggccccgcaggccttcctggagtgcctgggcgggacggggcccccgggcttcct
ggcgccccgggaccgcagggtcctccaggaagagacgggggaccagggaagactggccag
aaaggcagccccggcgaagcgggcgccccgggacctaagggaagcaagggggaccctggc
cccactggcgctcctggggagactggcttggcaggagcccccggaccagctggaccacca
gggccccccgggccccccgggcctccaggaccaggacttgccgcggggtttgaggacatg
gacggctctgggggacccttctggtcaactgctcacggagccagcgggccacagggacca
ccaggcctgccgggggtcaagggggaccctggaatagccggaccaccaggcgccaaggga
gaagtcggagccgatggacctcccgggttccccggcctccctggcagagagggcacagcc
ggagcccagggacccaaaggagaaaaagggacccagggagagaaaggtgacccagggagg
gatggagtggggcagcctggcctccccggaccccccgggcccccgggacctgtcgtctac
gtgtcggagcaggacagagcggtggcaggcgtgccgggacctgagggccggccggggtac
gcgggctttcctggaccggccgggccaaagggagatctgggctccaaaggccagcggggc
cccccgggacccaagggcgagaagggcgagccgggcccagtcttcagccccgatggcggc
atgctgggccctgcccagaaaggagccaagggagagcccggcttccgaggaccgccgggt
ccatatggacggccggggcacaaaggggagattggcttccctgggcggccgggtcgcccc
gggatgaacggactgaaaggcgagaaaggggagccaggacatgccagcgtcggctttggt
gtgaggggcccacccggtcccccggggcctccaggacccccaggccctcccgggactccc
gtctatgacagcaacgccttcatggagtctggccgccctggacctccaggattgccaggg
taccaggggcctcctggaccgaagggtgacaaaggagaagtgggcccaccaggaccacca
gggcagttcccgctcgacctcctccagctggaggctgaaatgaagggggagaagggtgat
agaggagacccggggcagaagggcgaacggggtgagcccgggggtggcggattcttcggc
tccagtgtgcccggcccccccggcccgccaggctaccctgggattccgggtcccaaggga
gagagcattcggggccagccaggcccacctggacctcaggggccccctggcatcggccat
gaggggcgtcaggggcctcctggcccccccggcccccccgggcccccagggcccccttcc
ttccccggcccttacaggcagacaatcagtgttcccggccccccaggcccacctgggccc
cccggaccccctggaaccatgggcacctcctcagggcaggtaaggatctgggccacgtac
cagaccatgctggacaaggtgccggaggttccggagggctggctcatctttgtggctgag
acagaggagctgtatgtccgggtccggaatgggttccggaaggtcctgctggaggcgcgg
acacccctcccacgtgggacggacaacgaggtggccgccctacagcccccgctggtgcag
ctgcacgagggcaacccgtacccccggcgggagctcacccactctacggcgcggccgtgg
cgggcggatgacatcctggcgggccccccgcgcctgccggacccccggccctaccctggc
gccccccaccacggcccctacctgcgcgtccagccggctcgccccacaggcgggcccgcc
cgtacccacacccaccaggacttccagcccgtgctccacctggtcgcactcaacagcccc
cagccgggcggcatgcgcggcatccggggcgcggacttccagtgctttcagcaggcgcgc
gccgtggggctggcgggcactttccgcgccttcctgtcctcgcggctgcaggacctctac
agcatcgtgcgccgcgctgaccgcacgggcgtgcccatcgtcaacctccgggacgaggtg
ctgtttcccagctgggaggccttgttctccggctccgagggccagctgaagcccggggcc
cgcgtcttctctttcgacggcagagacgtcctgcagcatcctgcctggcctcagaagagc
gtgtggcacggctcggaccccagcgggcgccgtctgaccgacagctactgcgagacgtgg
cggacagaggacgcggcggcggctggccaggcctcctcgctgctggcgggcaggctgctg
gcgcagaaagccgcgagctgccgcaacgccttcatcgtgctctgcatcgagaacagcttc
atgacctcctcctccaagtag
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integrated database retrieval system
