Puma yagouaroundi (jaguarundi): 121036849
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Entry
121036849 CDS
T07555
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03030
DNA replication
pyu03410
Base excision repair
pyu03420
Nucleotide excision repair
pyu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121036849 (RFC1)
03410 Base excision repair
121036849 (RFC1)
03420 Nucleotide excision repair
121036849 (RFC1)
03430 Mismatch repair
121036849 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyu03032
]
121036849 (RFC1)
03400 DNA repair and recombination proteins [BR:
pyu03400
]
121036849 (RFC1)
DNA replication proteins [BR:
pyu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121036849 (RFC1)
DNA repair and recombination proteins [BR:
pyu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121036849 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
Rad17
AAA_14
AAA_22
RuvB_N
AAA_7
AAA_5
AAA_33
AAA_17
AAA_30
AAA_18
AAA_16
nSTAND3
Zeta_toxin
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
TIP49
AAA_28
SKI
Motif
Other DBs
NCBI-GeneID:
121036849
NCBI-ProteinID:
XP_040341489
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVTDTVKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKPKPGKILRQDPVTYISETDEEDDFMCKKAASK
SKENGRSTNSYLGASNKKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKMVAS
KRKEPSQNVDDSRLNDEAIAKQLQFDEDAELERQLHEDEEFARTLAMLDEEPKTKKARKD
PEERETLSSVQANLSKAEKHKSPHKAKTEQFSDDRKNCSPKKQSKCESLKGSQQHLKSSP
HKIGETSPKASSKLALLKKKGESSYKETEPMASKRKENAIELKGQTKTPKKSKSSPAKKE
SISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAVEAEMKKEKCKLERTPQKNDQGKRKISPTKKESESKKSRLTPKRGSSMKSIKK
ETSAIWRSLDFEEQVAEETNVDSRARNLADDCSENKVENLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKRAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVC
QELGYSYVELNASDTRSKNSLKEIIAESLNNTSITGFYSSGGAHSVSMKHAVIMDEVDGM
AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM
SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIK
LGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPVAAGGDMKKHL
MLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLGK
HSSAGKHDRIVQDLAQHMGLRTYSSKRTVNMDYLSHIRDALVQPLISQGVEGVQDVIALM
DTYYLMKEDFENIMEISSWGGKPSLFSKLDPKVKAAFTRTYNKEVHLTPYSLQAVKTPRH
STGASLDSEYSEELNEDDSQADEKDQDSVETDAMIKKKTKSSKPSKSEKDKESRKGKGKS
SKK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacttgtgactgacaca
gtgaagaagaatgagaagacaaagtctgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatccgaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaacctaaacctggtaaaattctacgccaggatcctgtt
acatacatttcagaaacagatgaagaagatgactttatgtgtaagaaggcagcctctaaa
tcaaaagagaatggaagatctacaaatagttatcttggagcatcgaataagaaaaagaat
gaagaaaacactaagaccaagaataagcctttatcaccaataaaacttacccccacatca
gtgcttgattattttggaaccggaagtgtccaacgatcagataagaagatggtagcaagc
aaaagaaaagagccttcacaaaatgtggatgattccagattaaatgatgaagccatcgcc
aagcaattgcaatttgatgaagatgcagagctggagcgacagctgcacgaagatgaagag
tttgccagaacgttagccatgctggatgaagaaccaaagaccaaaaaggctcgaaaggac
ccagaagaaagagaaacattgtcatctgtccaagccaatttaagtaaagcagaaaaacat
aaatctcctcataaagcaaaaacagaacaattttcagatgacagaaagaactgtagtcct
aagaagcaaagtaaatgtgaaagtttgaaaggatctcagcaacatttgaagtcctcacct
cacaaaataggggaaacttctccaaaagccagttccaagttggcccttttgaaaaaaaaa
ggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaagaaaatgccatt
gaattgaaaggacagacaaaaactcctaagaaatccaaaagttctccagctaaaaaagag
tctataagtcctgaagattctgaaaagagacgcactaattatcaagcttatcgaagctac
ttaaatcgagaaggtcccaaagctttgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacatttgtaatcacaggagtgctggagtccattgaacgagatgag
gccaagtctttaattgagcgttacgggggaaaagtaacaggaaatgtcagtaagaaaaca
aactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggcagcagctttg
gggacaaatattattgatgaagatggcctattgaatctgattcgaactatgccaggcaag
aagtccaagtatgaaattgcagttgaagctgagatgaagaaagaaaagtgcaaattggaa
agaacaccccaaaaaaatgaccaaggaaaaagaaaaattagcccaactaagaaggaatca
gaatctaaaaaaagcagactgactcccaaaaggggcagctctatgaagtcaataaaaaag
gaaacaagtgcgatttggagatccctggacttcgaggagcaggtggctgaggagacaaat
gtggacagccgggctaggaatttggctgatgactgcagtgaaaacaaagtggaaaatttg
ctctgggtggataaatataagccaacctcactcaagaccataatcggacagcaaggtgac
cagagctgtgccaacaaactcctacgctggctccaaaactggcacaagagtccatctgaa
gataagaaacgcgcaaagtttggtaagtttgctggcaaagatgatggctctagtttcaaa
gcggcactgctctctggccctccaggtgtgggcaagacaaccacagcgtctctggtttgt
caggaattaggatatagctacgtggaactgaatgcaagtgacactcggagtaagaacagt
ttgaaggagattattgctgaatcactgaataataccagcatcacgggcttttattcaagt
ggaggtgcccattcagtaagcatgaaacatgctgtcatcatggatgaagtagatggcatg
gcaggcaatgaggacaggggaggaattcaggaattaattggtttgataaaacatacaaaa
attcccattatttgtatgtgcaatgatagaaatcatcccaagattcgttctttggttcat
tattgttttgatcttcgttttcaaagacctcgagttgaacagattaagggtgctatgatg
tctattgcatttaaagagggtttaaagatcccccctccagctatgaatgaaataattttg
ggagccaatcaagatatcagacaggttttacacaatctgagtatgtggtgtgcacgaagt
aaggcactaacctatgaccaggccaaggctgattctcatagagcgaaaaaggatatcaaa
ctgggcccatttgatgttgcccggaaagtgtttgcagctggagaggagactgctcatatg
tcgcttatggacaagtcagatctcttttttcatgattattcaatagcacccctctttgtc
caggagaactacgtacatgtgaagcctgtagctgcagggggtgacatgaaaaagcacttg
atgcttttaagcagagcagcagatagcatatgtgatggtgacctcgtggaccgtcagatc
cggagtaagcaaaactggagtcttctgcccacgcaggccatttatgccagtgttcttcct
ggagagttaatgagggggtacatgacccagtttcctaccttcccaagctggttggggaag
cactcatctgccggcaaacacgatcgtattgtacaggacctagcacagcacatgggtctc
agaacttattccagcaaaaggactgtaaacatggattatctgtcacatataagggatgca
cttgtacagcccttgatctcccaaggggtagaaggagtacaggatgttattgctcttatg
gacacatactacttgatgaaagaagactttgagaatatcatggaaattagcagctgggga
ggcaaacctagtctcttctccaagttggatcccaaggtgaaagcagctttcacaagaacc
tacaataaggaagtccaccttactccatattcactccaggcagtgaagacacccagacac
agcacaggcgcatcactggattctgaatacagtgaagagttaaatgaagatgactctcaa
gctgatgagaaagaccaagattctgtggaaactgatgcaatgatcaagaaaaagacaaaa
tcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaaagt
tcaaagaaatga
DBGET
integrated database retrieval system
