Herpailurus yagouaroundi (jaguarundi): 121038716
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Entry
121038716 CDS
T07555
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pyu04121
]
121038716
Enzymes [BR:
pyu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121038716
Ubiquitin system [BR:
pyu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
121038716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121038716
NCBI-ProteinID:
XP_040344357
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSK
PAYGTAPEVQLMDASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHSLHPMEHEF
YEDNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDVQNREEAVALLSSEECKRIVLLVARPETQLDEGWLEDE
RNEFLEELNLEMLEEQHNEAMQGTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT
DESLRNDESSEQENAAEDPNGASLKSRRELGQSQDTLGSVELQCNESFASGEYIDSDCIG
NPDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECHQGEQEGVEHELQLLNEELRNIEL
ECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRGKLDDIIEHPEKSDKDSSSA
YNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAANQSSSGLSSKESTSPKAKST
EPGCSIEGKEKISESGKLSDQEQTSSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQ
QKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILRERALKI
KEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSG
SEGRKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcacttttcagaaaagagaggaacactacaaactgctgtatgaa
gtttcccaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagct
tttcgaaatgccaaggaacccattgtggtccaggtgctaagacggacgcctctcagtaaa
cccgcgtatggaacggccccggaagtgcagctcatggacgccagcactcagacagacatc
accttcgaacacatcatggctctggccaaacttagaccacctacccctccagtgccagac
atctgtccatttctgctctcagacagctgccattctcttcatccgatggagcatgaattt
tatgaggacaatgagtatctttccagcttgcctgctgatgcagacagagcagaggacttt
gaatatgaggaggtcgagctgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgttaccgaacggatgatgaagaagacacgggcatttatgtcagcgaggtagatccaaat
agcattgctgccaaagatggccgaattcgagaaggggatcgtattttgcaaataaatggg
gaagacgtccagaatcgagaagaggcagtggcgttgctgtcgagcgaggagtgtaagaga
atcgtgttgctcgtcgcaaggccagagactcagctggatgaaggctggctggaagatgaa
aggaatgaattcttagaggagttaaacttggagatgctggaagaacagcataatgaagca
atgcagggcacggccaatgaggtggagcagccaaaaaaacaagaagaagaagagggcaca
acagatacggcaacgtcctcctctaacaaccacgagaaagacagtggggtggggcgcaca
gatgaaagcttgcggaacgatgagagctcagagcaggagaacgcagcggaggatcccaac
ggcgcatccctgaagagcaggagagagctggggcagagccaagacactctaggaagcgtt
gaacttcagtgcaatgagagcttcgcgtctggtgaatacatagactcagactgcattggc
aacccagatgaggaatgtgaaagattccgacagctcttggagctcaaatgcaagattcga
aaccatggagaatatgacctgtattactcgagcagcacaatagaatgccatcaaggggaa
caagagggagtggagcacgaactacagttgcttaacgaagaactgagaaacattgaactg
gagtgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagac
atctgggctttgcacgatggaggattccggaattacaacaccagcatagacatgcaaagg
ggaaagctagatgacatcatcgaacatccagaaaagtcagacaaggacagttctagcgct
tacaacacagctgaaagctgcagaagcactccactcactgtggaccgttcccctgacagt
tcccttccaagaatgatcaacctcaccaataagaaaaacctgagaagcacaatggccgcc
aatcagtcttcttccgggctgagcagtaaagagtcgacctcccccaaagccaaaagcact
gaaccaggttgcagcattgaaggcaaggagaagatttcagagagcggcaagctttctgat
caggagcaaaccagcagcgaacacatcccttacctctccccttaccacagctcctcctac
agatacgcaaatatcccggcacatgcccgccattatcaaagctacatgcagttgattcaa
cagaaatctgcagtggagtatgcgcagagtcagctgagtttagtgagcatgtgcaaggag
tctcagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgacgggacg
cggtacataacaaagagaccagtacgagaccggattctgagggaacgtgccttaaagatc
aaggaggagcgcagtggcatgacgacggatgacgacaccatgagcgagatgaaaatgggc
cgctactggagcaaagaggaaagaaagcaacacctggttcgggccaaggagcagcgtcgg
cgccgggagttcatgatgcggagccggttggagtgtctcaaggagagcccccagagcggc
agcgagggcagaaaggagatcaacatcattgaactgagccacaaaaagatgatgaaaaaa
agaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggggcc
aagtctcctgatggcacacgagttcataatgcctttttgtcagtcaccaccgtatga
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integrated database retrieval system
