Herpailurus yagouaroundi (jaguarundi): 121039045
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Entry
121039045 CDS
T07555
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu05016
Huntington disease
pyu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
121039045 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
121039045 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121039045 (HTT)
04131 Membrane trafficking [BR:
pyu04131
]
121039045 (HTT)
03029 Mitochondrial biogenesis [BR:
pyu03029
]
121039045 (HTT)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121039045 (HTT)
Membrane trafficking [BR:
pyu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121039045 (HTT)
Mitochondrial biogenesis [BR:
pyu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121039045 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
121039045
NCBI-ProteinID:
XP_040344986
LinkDB
All DBs
Position
Unknown
AA seq
3139 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQPQPPPPPPPQPPQPLPQAQPPPQPQPP
PPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGI
AMELFLLCSDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAAL
WRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNE
IKVLLKAFIANLKSGSPTIRRTAAGSAVTICQHSRRTQYFYSWLLNVLLGLLVPVEDEHS
TLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVCPSTEQLIQVYELTLHYTQH
QDHNAVTGALELLQQLFRTPPPELLQALTAPGGGQRSGVQYGPGGRSRSGSIAELLAGGG
SSCSPVLSRKQKGKVLFGDAAALEDDSESRSEGSSPAFAASVKGEIGGELAASSGVSTPG
SAGSTADSVGHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVP
SDPAMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGLQIGQPQDE
DEEAAGILPEEDVDAFRNSAAALQQAHLLKSMGHSRRPSDSSVDTFVSRDEAAEAGDQEN
KPCRIKGDIGQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGA
AVALHPESFFSKLYKVPLDSVEYPEEPYVSDILNYIDHGDPQVRGATAVLCGTLISSTLS
RSRFQVGDWMGTVRALTGNTFSLEDCIPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSS
SSELGLQLITDVLSLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLL
KLQDRVLHDVVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVY
LKLLMHETQPPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAVSHELVTSTTRAL
TFGCCEALCLLSTAFPVCVWSLGWHCGAPPLSVSGESRKSCTVGMATVILTLLSSAWFPL
DLAAHQDALVLAGNLLAASAPRSLRSSWTSEEEANPAAAKQEEVWPALGDRTLVPMVEQL
FSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPLSPK
KGSEASPASRQSDASGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSAE
KFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFG
TNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQA
EQDHDASGWFDVLQKVSTQLKTNLTSTTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTS
VQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFL
VLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAG
KELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQIADVILPMLAKQ
QMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMAPVSTVQLWISGILAILR
VLISQSTEDIVLSRIQELSFSPYLISCPVINRLREGDSTSTPEEHSEGRQMKSLPEETFS
RFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASR
LLTVDSSDSSFYGLDRLNAQVRAMVPTHPALVLLWCQILLLVSHTDHRWWAEVQQTPRRR
SLSSTKSLGPQMSGEEGDSDAASKPGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIV
NHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTTLKKTLQCLEGIH
LSQSGAVLTLYVDKLLCTPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELTRIQE
YLQSSGLAQRHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALETVIPDKDWYL
RLVKSQCWTRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREVSGGQR
SPLFEAARLATLDRVTGLVQQLPAAHHVFQPFLPAEPTAYWNKLNDLFGDAVLYRSLTTL
ARALAQYLLVFSKLPGHLHLPPEKERDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDC
CCLALQLPSVWSALASPEMVTHACSLIHCVRFILEAIVVQPGDQLLSPDRRMNTPKAARE
DEVDSNTQNPAYITAACGMVAEMVEALPSVLALGHKRNSSTPAFLTSVLRNIIISLARLP
LVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQ
FEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPA
VSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENVATHHLYQAWDPVPSL
SPATTGALIGHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEE
ADVPTSASPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRS
LLVVSDLFTERTQFEMMYLTLTELRRAHPAEDEILIQYLVPATCKAAAVLGMDKAVAEPV
SRLLESTLRSNHLPSRVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGAAHCVNV
HSQQHVLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCVLRGLE
RLLLSEQLCRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSP
AAPDSESVIVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLS
NQQPYPQFMATVVYKVFQTLHSSGQSSMVRDWVMLSLSNFTQRSPVAMAVWSLSCFFVSA
STSPWVSAVLPHVISRMGKLERVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPG
NPYHRLLTCLRNVHKVASC
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggaaaagctgatgaaggccttcgaatccctcaagtctttccagcagcag
cagcagcagcagcaacagcagcaacagcagcagcagcagccgcagccgccgccgccgccg
ccgcctcagcctcctcagccgctgccgcaggcgcagccgccgcctcagcctcagccgccg
cccccgccgccgcccccgccgccccccggcccggccgtggccgaggagccgcttcaccga
ccaaagaaagaactctcagccaccaagaaagaccgtgtgaatcactgtctgacgatatgt
gagaacatagtggcacagtcactcagaaattctccagaatttcagaaacttctgggcatc
gctatggaactcttcctgctgtgcagtgatgatgcagagtcggatgtcaggatggtggct
gacgagtgcctcaacagagtcataaaagcgctgatggactcgaatcttccgcggttacag
cttgaactctataaggaaatcaaaaagaatggcgctccccggagcctgcgtgctgccctg
tggaggtttgcggagctggctcacctggttcggcctcagaaatgcaggccttacttggta
aaccttttgccttgcctgactcgaataagcaagagacccgaggaatctgttcaggagacc
ttggctgcagctgtacctaaaattatggcttcttttggcaattttgcaaatgacaatgaa
attaaggttctgttgaaggctttcatagcgaatctgaagtcaggctcgcctaccattcgg
cgtactgcagctggctcagcagtgaccatctgccagcactccagaaggacgcagtacttc
tatagctggctactgaacgtactcctgggcttgctggttcctgttgaggacgaacactct
accctcctgattctcggagtgctgctcacgttgaggtatttggtgcccttgctgcagcag
caggtcaaggacacgagcctgaaaggcagctttggggtgacacggaaagaaatggaagtc
tgtccctcaactgagcagctcatccaggtttacgaactgaccttgcattacactcagcac
caagaccacaatgccgtgactggggcgctggagctcctgcaacagctcttcaggacgccc
ccgcccgagctcctgcaggccttgaccgcgccgggcggcgggcagcggagcggcgtgcag
tatgggcccggcggccggagccgcagcggcagcatcgcggagctcctagccggagggggt
tcttcatgcagccctgtcctttcaagaaaacaaaaagggaaagtgctcttcggagacgca
gcagccttggaggatgactccgagtccaggtcggagggcagcagccccgccttcgcagcc
tcagtcaagggtgagattggtggtgagctggcggcctcttctggagtctccactcctggc
tccgccggttcaactgccgactccgtggggcacgacatcatcaccgagcagccccgctca
cagcacacgctgcagccggactcggtggatctgaccggctgtgacttggcgagcgctgcc
accgacggggatgaggaggacatcctgagccacagctctagccagatcagtgccgtcccg
tctgacccagccatggacctgaacgatggcacccaggcctcctccccagtcagtgacagt
tcccagaccaccaccgaagggcccgattcggctgtgaccccttcagacagttctgaaatc
gtgttagatggggccgacagccagtattcggggttgcagatcggacagccacaggacgag
gatgaggaggccgcgggcattcttccggaggaagacgtagatgctttccgaaactctgca
gctgccctgcagcaagcacatttattgaaaagcatgggccacagccggcggccctccgac
agcagtgtggatacgttcgtttcaagagacgaagctgccgaagcaggagatcaagaaaac
aagccttgccggatcaaaggtgacataggacagtctaccgatgacgattctgttcctctt
gtccattgtgtccgccttctgtcggcttcgtttttgctgactggggagaagaatgtgttg
gttccggacagggatgtgagggtcagcgtgaaggcattggcactgagctgtgtgggagcc
gctgtggcccttcatcctgagtctttcttcagcaaactttacaaagtacctcttgactcc
gtggagtaccctgaggagccatatgtgtcagacatcctgaactacatcgatcatggagac
ccccaggtcagaggagccacggccgttctctgtgggaccctcatctcctccaccctgagc
aggtcccgcttccaagtgggagactggatgggcaccgttagagctctgacaggaaataca
ttttctctggaggactgcattcctttgctgcagaaaactttgaaggatgaatcttctgtc
acttgcaagttggcctgcacagctgtgaggcactgtgtcatgagtctgtgcagcagcagc
tccagtgaactgggactgcagctgatcaccgatgtactgagcctgagggacagctcctac
tggctggtgaggacagagcttttggagacgctcgcagagattgactttaggttggtgagc
tttttggaggcaaaagcagaaaatctacacagaggggcccatcattacacagggctttta
aaactgcaggaccgagtgctccatgacgtcgtcatctacttgcttggggacgaagacccc
agggtgcgacacgttgccgcagctgcactgatgaggcttgtcccgaagctgttttataaa
tgtgaccaaggacaggccgacccagtggtggctgtggcgagagaccaaagcagcgtttac
ctgaaacttctcatgcacgagactcagcccccatctcacttctctgtcagcaccataacc
agaatatacagaggctataacctactgccaagcatgacagatgtcactgtggaaaataac
ctctcgagagtcattgcggcagtttcccacgagctggtcacgtcgaccacgcgagcactt
acgttcggatgctgcgaggctttgtgtcttctttccactgcctttccagtctgcgtttgg
agtttaggctggcactgtggggcacccccgctgagcgtgtccggtgagtccaggaagagc
tgtactgttggcatggccacggtcatcctcaccttgctctcgtcagcttggttcccgctg
gacctcgcagcgcaccaggatgcactggtgctggccggaaacctgctcgcagccagtgcc
cccagatctctgagaagttcgtggacctctgaggaagaggccaacccagcagccgccaag
caggaagaggtctggccggctctgggtgaccggaccctggtgcccatggtggagcagctt
ttctcccacctgctgaaggtgattaatatctgtgcacacgtgctggacgatgtggctcct
ggaccggcaataaaggcagccttgccgtccctaacaaaccctccttctctaagtccgatc
cgccggaagggaaaggagaaagagccgggagagcaggcctctgcgcccttgagccccaag
aaaggcagcgaagccagtccagcctctcgacaatccgacgcctcagggcctgttacagca
aataagtcctcatcactggggagtttctaccaccttccttcatacctcaaattgcacgat
gtcctgaaagctactcacgctaactataaggttaccttggaccttcagaacagtgctgaa
aagtttgggggctttctgcgttctgccttggatgtgctctctcagatcctagaactggca
acactgcaggacatcgggaagtgtgtcgaggagatcctaggctacctgaaatcctgtttc
agtcgagaaccgatgatggcaactgtttgtgttcagcagttgctgaagactctctttggg
acaaacttggcctcccagtttgatggcttgtcttccaaccccagcaagtcccagggccga
gcgcagcgtctgggctcctccagcgtgaggccgggcttgtaccactactgcttcatggct
ccctacacccacttcacccaggccttagccgacgccagcctgaggaacatggtgcaggca
gagcaggaccacgacgcctcagggtggtttgacgtgcttcagaaagtgtctacccagttg
aagacgaacctcaccagcaccactaagaaccgcgcagataagaatgctattcacaatcac
attcgtttgttcgagcctctggttataaaagctttaaagcagtacacaaccacaacatct
gtgcagctacagaggcaggtcttagatttgctggcacagctggttcagttacgggtcaat
tactgtcttctggattcagatcaggtgtttattggatttgtgctgaagcagttcgaatac
attgaagtaggccagttcagggaatcagaggcaattattccaaacatctttttcttcctg
gtattactgtcttacgagcgctatcattcaaaacagatcattggaatccctaaaatcatt
cagctctgtgacggcatcatggccagcgggaggaaggctgtgacacatgccataccggct
ctacagccgatagtccatgacctgttcgtactgagaggagccaataaagctgatgcagga
aaagagcttgaaacccagaaagaagtggtggtgtccatgctgctgagactcatccagtac
catcaggtgctggagatgttcatcctggtcctgcagcaatgccacaaggagagcgaggac
aagtggaagcggctgtcccggcagatcgccgacgtcatcctcccgatgttggccaagcag
cagatgcacattgattctcacgaagcccttggcgtgttaaatactttatttgagattctg
gccccttcctccctccgtcccgtggacatgcttttacggagtatgttcgtcactccagac
acaatggcacctgtgagcactgttcagctgtggatatcaggaatcctagccattttgagg
gttctcatttcccagtcaactgaagacattgttctttctcgtattcaggagctctctttc
tctccatatttaatctcctgtccagtaattaataggctaagagagggggacagtacttcg
acaccagaagaacacagtgaagggagacaaatgaagagcttgccggaagaaacattttca
agatttctactacaactagttggcattcttttggaggatattgttacaaagcagctcaaa
gtggaaatgagtgaacagcaacatactttctactgccaagaactgggcactctgctgatg
tgtctcatccacatcttcaagtctggaatgttccgtaggatcacagcagccgcctccaga
ctcctcaccgtggacagcagcgacagcagcttctacggcctggacaggctgaacgcgcag
gtgcgcgccatggtgcccacgcatccggcgctcgtgctgctctggtgccagatcctgctg
ctcgtcagccacaccgaccaccgctggtgggcagaggtgcagcagacccccaggagacgt
agtctgtccagtacgaagtcactcggcccccagatgtccggagaggagggggactcggac
gcggccagtaaacccggaatgtgcaacagggaaatagtgcggcggggagctctcattctc
ttctgcgattatgtctgtcagaacctgcacgattcagagcacttaacgtggctcatcgtg
aatcatattcaggacctgatcagtctgtcccatgagcctcccgtgcaggatttcattagt
gctgttcaccggaactccgccgccagcggcctcttcatccaggcaattcagtctcgctgt
gagaacctttcagcccccaccaccctgaagaagacgcttcagtgcttggaagggatccac
ctcagccagtcaggcgccgtgttaacactgtatgtggacaagcttttgtgcaccccgttc
cgagcgctggctcgcatggtcgacacccttgcctgtcgccgcgtggagatgcttttggcc
gcaaatttgcagagcagcatggcccagttgccggtggaggaactaaccagaatccaggaa
taccttcagagcagcgggctggctcagagacaccagaggctgtactccctgctggacagg
cttcgtcttgctaccgcaccgggctcccgtggcccttctcctccagtcacgtcccacccg
ctggacggggatgggcccctggcactggagacagtcattccagacaaagactggtaccta
cgtctagtcaaatcccagtgctggactaggtcagattctgcgctgctggaaggggcagaa
ctggtgaatcggattcctcccagtgacatgagcacgttcatgatgaactcggaattcaac
ttaagcctgttggcgccgtgcctgggccttggcatgcgcgaagtctccggaggccagagg
agtccacttttcgaagcagctcgcctggcgactctggaccgtgtgaccggcctggtgcag
cagctccctgccgcccaccacgttttccagccgttcctgcccgcagagcccaccgcctac
tggaacaagttgaatgatctatttggggatgctgtgttgtatcgctccttgaccactctg
gcccgggctctggcccagtacctgctggtattctccaaactgcccggccacttgcacctt
cctcctgagaaggagagggacacggtgaagtttgtggtcatgaccctcgaggccctgtcg
tggcatttgatccatgagcagatcccgctgagtctggaccttcaggcgggcctggactgc
tgttgcctggccctgcagctgcccagcgtctggagcgcactcgcctccccagagatggtg
acccacgcctgttctctcatccactgtgtccgcttcatcctggaagccattgtggtgcag
cctggggaccagcttcttagtccagaccgaaggatgaacaccccaaaggctgccagagag
gacgaagtagattcaaacacacaaaacccggcctatattaccgcagcctgtgggatggtg
gcagaaatggtggaggctttgccgtcggtgttggccttgggccataaaaggaatagcagc
accccagcgtttctcacatcggtgctcaggaacatcatcatcagcctggctcgcttaccc
ctcgtcaacagctacacgcgcgtcccccccctggtttggaaacttggatggtcacccaaa
ccgggaggggattttggtacagcgtttcctgagatcccagtggagttcctccaggagaag
gaggtctttaaagagttcatctatcgcatcaacactctagggtggaccagccgcacccag
tttgaggaaacgtgggccaccctcctcggtgtcctggtgactcagcccctcgtgatggag
caggaggagagcccgccggaagaagacacggagaggacccagatcaacgtcctggccgtg
caggccatcacctcactggtgctgagcgcgatgactgtgcccgtggccggcaacccggcc
gtgagctgcctggagcagcagccccggaacaagcccctgaaagctctcgacaccaggttt
gggaggaagctgagcattatcagaggaattgtggagcaagaaatccaagcaatggtttcg
aagagagagaacgtcgccacccatcacttgtaccaagcgtgggaccccgtcccctctctc
tctccagccactacaggtgccctcatcggccacgacaagcttctgctgcagatcaaccct
gagcgggagctggggaacatgagctacaagctcggccaggtgtccattcactctgtgtgg
ctggggaacagcatcacgcccctgagagaggaggagtgggaggaggaggaggaggaggag
gccgacgtccccacgtctgcatcaccacccacgtcgccggtcaactccaggaagcaccgg
gctggagtcgacatccattcctgttcccagtttttgcttgaattgtacagtcgctggatc
ctgccgtcagggtcagccagaaggacccccatcatcctgatcagcgaagtggtccgatct
ctcctagtggtctcagacttgttcactgagcgcacccagtttgagatgatgtatctgacg
ctgaccgagctgaggagggcgcaccctgcagaagacgagattctcattcagtacctggtc
cctgccacctgcaaggcggctgccgtcctcggaatggacaaggccgtggccgagcccgtc
agccggctgctggagagcacactgaggagcaaccacctgcccagcagggtcggggccctg
catggcgccctctacgtgctggagtgtgacctcctggatgagacagcgaagcagcttgtc
cctgtcatcagcgactacctcctgtccaacctcaaaggggcagcccactgcgtgaatgtt
catagccaacagcacgtgctggtgatgtgtgccaccgccttctacctgattgagaactat
cccctggacgtaggcccagaattctctgcgtcagtaattcagatgtgtggggtgatgctg
tccgggagtgaggagtccactccgtccatcatttaccactgcgtcctgcggggcctggag
cgtcttctgctctccgaacagctgtgccggctggatgctgagtccctggtcaagctgagt
gtggacagagtgaacgtgcacagcccgcaccgggccatggctgccctgggcctgatgctc
acctgcatgtacacagggaaggagaaaatcagcccaggcagaacctcagaccccagcccc
gccgccccagacagcgagtccgtgatcgtggctatggagcgtgtgtccgttcttttcgac
agggtcaggaaaggattcccctgtgaagccagagtggtggcacggatccttcctcagttt
ttagatgacttcttcccaccccaggatgtcatgaacaaagtcattggggaatttttgtcc
aaccagcagccatacccacagttcatggccaccgttgtgtacaaggttttccagaccctg
cacagcagtgggcagtcgtccatggtccgggactgggtcatgctgtccctctccaacttc
acccagaggagcccggtggccatggctgtgtggagcctctcctgcttcttcgtcagtgct
tccactagcccctgggtctccgccgtccttccccacgtcatcagcaggatgggcaagctg
gagcgagtggacgttaacctcttctgcctggtggccacagacttttacagacaccagata
gaggaggagctggaccgccgggccttccagtccgtgttcgaggtggtcgcggctccggga
aacccataccatcgactgttgacttgtttgcggaacgtccacaaagtcgcctcgtgctga
DBGET
integrated database retrieval system
