Herpailurus yagouaroundi (jaguarundi): 121041560
Help
Entry
121041560 CDS
T07555
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu04140
Autophagy - animal
pyu04148
Efferocytosis
pyu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121041560 (VPS39)
04148 Efferocytosis
121041560 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121041560 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pyu04131
]
121041560 (VPS39)
Membrane trafficking [BR:
pyu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
121041560 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
121041560
NCBI-ProteinID:
XP_040348311
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAAVPTDVESPESGSC
NRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASL
FTCDLEHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICV
GFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKC
ALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVAS
NHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQ
KRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDY
LTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPL
LRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERT
VQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKSL
AIPYLEHVIHVWEETGSQFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGE
YRRKLLIFLEISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMA
EEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHH
SKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILH
QQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgccttcgagccagtgccgatcctggaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggcaccaaacaaggacatcttcttctctat
aggatccggaaagatgctgcagtgccaacagatgtagaatctcctgaaagtggcagttgc
aacaggtttgaagtgacactagagaaatccaataaaaacttctccaaaaagattcaacag
atccatgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtc
catgacctgttgacatttcaacaaatcactacggtttcaaaggcaaagggagcatcactg
ttcacatgtgaccttgagcacacagagactggtgaggaggtgttgcggatgtgtgtggca
gtgaaaaagaagctgcagctctatttctggaaggacagggaatttcacgaattgcagggg
gactttagtgtaccagatgtgcccaagtccatggcatggtgtgaaaattctatctgtgtg
ggtttcaagagagactactacctaataagggtggatggaaaggggtccatcaaagagctc
tttccaacaggaaaacagctggagccgttagttgcacctctggcagatggaaaagtggct
gtgggtcaggatgatctcaccgtggtgctcaatgaggaggggatatgcacacagaaatgt
gccttgaactggacagacataccagtggccatggagcaccagcctccctacatcattgca
gttttgcctcgatatgtggagatccgaacattcgaaccgaggcttctggtccagagtatt
gaattgcaaaggccccgcttcattacctcgggaggatcaaatattatctatgtggccagc
aatcattttgtttggagactcattcctgtccccatggcaacccaaatccaacagcttctc
caggacaagcagtttgaactggctctacagcttgcagaaatgaaagatgattccgacagt
gaaaagcagcaacagatccatcacattaagaacttgtatgccttcaacctcttctgccag
aagcgttttgatgagtccatgcaggtctttgctaagcttggcacagatcctacccatgtg
atgggcctgtacccggacctgctgcccacagactacaggaaacagctacagtaccctaac
ccactgcctgtgctctcgggggctgaattggagaaggcacacttagctctgattgactac
ctgacacagaaacgaagccaactggtaaagaagctgaatgactctgatcaccagtctagc
acctccccgcttatggaaggcactcccaccattaaatccaagaagaagctgttgcaaatc
atcgacaccaccttgctcaagtgctacctgcatacgaacgtggccctggtggcccctctg
ctgcgcctggagaacaatcactgccacatcgaagagagcgagcatgtgctgaagaaggcg
cacaagtacagcgaactgataatcctgtatgagaagaaggggctccacgagaaagctctg
caggtgctggtggaccagtccaagaaagcaaactcccctctgaaaggccatgagaggacc
gtgcagtatctgcaacatttgggcacagaaaacctgcatttgattttttcctactcagtg
tgggtgctgcgagacttcccagaggatggcctgaagatatttaccgaagatctcccagag
gtagagtccctgccacgagaccgagtgcttggcttcttggtggagaattttaagagtctg
gctattccttatctggaacatgtcatccacgtttgggaggagacaggctctcagttccac
aactgcctaatccagctgtactgtgagaaggtgcaaggtctgatgaaggagtatctcctg
tccttccctgcaggcaaaactccagttcctgctggagaggaagaaggtgagctgggagaa
taccgacggaagctccttatattcttggaaatttctggctactatgacccaggccggctc
atctgtgacttcccttttgatggcctcttagaagagcgcgcactgctgctggggcgcatg
gggaagcatgagcaagccctcttcatctacgtccacatcctgaaggacacaaagatggct
gaggagtactgccacaagcattatgaccaaaataaagatggcaacaaagatgtgtatctg
tccctgctccggatgtacctgtcaccccccagtgttcactgcctggggccaatcaagctg
gaactgctggagccacaagccaacctccaggctgccctgcaggtccttgagctgcaccac
agcaagctggacaccactaaggccatcaaccttctcccagcaaacactcagattaatgat
atacgcatctttctggaaaaggtcttggaagaaaatgcacaaaagaaacggttcaatcaa
gtgctcaagaaccttctccatgcggaatttctgagggtccaggaagagaggattttacac
cagcaggtgaagtgtatcatcaccgaggagaaggtgtgcatggtgtgtaagaagaagatc
gggaacagtgcatttgcgagataccccaatggcgtggtcgtgcactacttctgttccaaa
gaggtaaacccagctgacacctga
DBGET
integrated database retrieval system
