Puma yagouaroundi (jaguarundi): 121044080
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Entry
121044080 CDS
T07555
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pyu
Puma yagouaroundi (jaguarundi)
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyu03021
]
121044080 (TAF1B)
Transcription machinery [BR:
pyu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121044080 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF4661
Motif
Other DBs
NCBI-GeneID:
121044080
NCBI-ProteinID:
XP_040351972
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MVNVCKCQKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVINTGAIPNTKIQAI
NRGLKRKRKLERGWDWYVCEGFQHILYQQAEALKSLGVGPELKNEVLHNFWKRYLQKSKQ
AYCKNPVCRRKVTVLEDNQSHSDWDSEPELLSDFSCPSFVESGTESQPDGLAQKPFPISK
ASQSETASICSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETVTLSELLRFVE
EGHIPYINAFQHFPEEMKLYGRDKGIFAIESWPTYEDIYKKMIEIAKFLDLPRFPDITED
CYLHPNILCMKYLMEVNLPDEMNDLTCQVVKMTGVGEVDFLTFDPIAKMAKTVKYDVQAV
AVIVVVLKLLFLLDDNLEWSLSNTAEKYNENNKEDKPWFDFRKWYQVMKKSIDEKKQEWE
EARAKYLWKSEKPLYHSSIDRAVAFKRREMVVDLQKQFSTLVDSTPTVGRKKPSSFQFNW
AEGDAARTCFHGHSLRGILENKGQSLTTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSY
QFIINLFAFLLRIKTSFLHEEVSLIEKRLFKTKYSKTKKKSSRSRKGRKY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggttaacgtctgtaaatgccagaaagaattcaaagaaagatgcactcagtgtgctgct
gtctcttggggtcttactgatgaaggcaaatattactgcacttcttgccacaacgttaca
gaaagatcaaaggaagtcataaacactggggctattcctaatacgaaaatacaagccatc
aaccggggacttaaaagaaaaagaaaacttgagagaggctgggattggtatgtgtgtgaa
ggttttcagcacatactttatcaacaagcggaagccttaaagagccttggagtgggccca
gaactaaagaatgaagttttacataatttttggaagcgctaccttcagaagagcaagcag
gcctattgtaaaaacccagtttgtagaagaaaagttacggtattagaagataaccaaagt
cattcagactgggatagcgagcctgagctgctgagtgacttcagctgcccttcttttgtt
gaaagtggaacagagtctcagcctgatggtcttgctcagaagcctttccccatcagcaaa
gcatcacaatcagaaacagcatccatctgttctggatctctcgacggagtggaatattcg
ctacgaaaggagaaggggatcgtgaagatgacggtgccgaggacacttgccttctgctac
ctgtcactgctgtggcagagagagacagttactctctcagagcttttgagatttgttgaa
gagggacacattccttacataaatgcttttcagcattttccagaagagatgaaattatat
gggcgtgacaaaggaatctttgctatagagtcttggcctacctatgaggatatctataaa
aagatgattgaaattgccaaattcttagatttgccacgttttccagacataactgaagac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgaatgatttaacctgccaagtggtaaaaatgactggagtaggagaagtggatttt
ctgacatttgaccccatagctaaaatggcaaaaactgttaaatatgatgtacaagctgtc
gccgttattgtagtagtattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatactgctgagaaatataatgaaaacaacaaagaagataagccatggtttgat
ttcagaaaatggtaccaagttatgaagaaatctattgatgagaaaaaacaagaatgggag
gaagccagggcaaagtatctgtggaaaagcgaaaagccactctaccactcatccattgac
agagcagtggcatttaaaagacgagaaatggtggtggatctacaaaaacaatttagcaca
ttggttgattcaacaccaactgttggaagaaaaaagccttcgagttttcagttcaactgg
gctgaaggagacgcggccagaacctgtttccacggacacagcctccgggggatcctggag
aacaaaggccagtcgctgacaaccaagaactcactctactggctaagtacacagaaattc
tgtagaagctattgtaaacatgtgacgacctatgaagaatcaaatttttctctgagttat
cagtttataataaacctcttcgccttcctgctaagaataaagacctcttttctccatgaa
gaagtgagcttaattgaaaagagacttttcaaaacaaaatacagtaaaacgaaaaagaaa
tcttcaagatccaggaaagggagaaaatactga
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