Puma yagouaroundi (jaguarundi): 121044931
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Entry
121044931 CDS
T07555
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03013
Nucleocytoplasmic transport
pyu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121044931 (CASC3)
03015 mRNA surveillance pathway
121044931 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyu03019
]
121044931 (CASC3)
Messenger RNA biogenesis [BR:
pyu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121044931 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121044931
NCBI-ProteinID:
XP_040353369
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANCSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHEASYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDAAPPAPDRPIEKKSYSRARRTRIKAGDAVKV
TEEVPPPPEGLNPAPPVPETTPSPPAKTGAWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggcgca
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagcggctctctgccttctcagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggcgaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatggagggcgatgctgttctctcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattgttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtaactggagagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaggatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaacccaggaggag
gaagtcagacccaaagggagacagcgaaagctatggaaggatgagggtcgctgggagcat
gataagttccgggaagatgaacaggctccaaagtctcgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttattaacagaaat
gctgcaggtactggccggatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggatgctggtgggcagcatggtggccgatctggt
gagactgttaaacatgaagccagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagctgatgctcaagtgcttggcagtcctgagaaggaagaggcagcc
tcagagattccagctgctgctcctgatgctgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaacgagaatcaaagctggagatgcagtcaaggtt
acagaggaggtgccccctccacctgaagggctgaacccagcgcctccagtcccagaaact
accccttctccacctgctaagactggagcctgggaggctccagtggattcaactacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggagtccagggcag
ccttcgttcctacagccacgtgagcttcggggtatgcccaatcacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcagagacctgtgccggagccccctgcccctcctgtgcacatc
agtatcatggaaggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctccccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcctagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctatatcctaacacgcaggccccatcacaggta
tatggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccattaagcccccacctcctgaggttgtaagcagg
ggttccagttaa
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