Pyrobaculum sp. WP30: PYWP30_00042
Help
Entry
PYWP30_00042 CDS
T04013
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pyw
Pyrobaculum sp. WP30
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyw03016
]
PYWP30_00042
Enzymes [BR:
pyw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PYWP30_00042
Transfer RNA biogenesis [BR:
pyw03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PYWP30_00042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sen15
tRNA_int_endo
HSR
CENP-C_C
Motif
Other DBs
NCBI-ProteinID:
AKT33715
LinkDB
All DBs
Position
complement(32680..32973)
Genome browser
AA seq
97 aa
AA seq
DB search
MEDVLVEQVFKDLQARGFKFLERLGDRMFVAEKKDEYLFYVMVEGVEVTVHTLLSVINMG
ETLSMPAVLALVSNDGTVTYYFVRKIRLPRNVYAEAV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacgtacttgtcgagcaagtcttcaaagaccttcaggcccgcggatttaagttc
ctggagaggctaggggataggatgttcgtggcggagaaaaaggacgagtatctcttctac
gtcatggtggagggcgtggaggttacggttcacactctgttaagtgtcataaacatgggc
gagactctctcaatgcctgcggtgttggcgctggtgagcaacgacggcacggtgacgtat
tacttcgtgaggaagatcaggctaccgcgcaacgtctatgctgaagctgtttga
DBGET
integrated database retrieval system
