KEGG   Pyrobaculum sp. WP30: PYWP30_00735
Entry
PYWP30_00735      CDS       T04013                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
pyw  Pyrobaculum sp. WP30
Pathway
pyw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pyw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PYWP30_00735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyw03032]
    PYWP30_00735
DNA replication proteins [BR:pyw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PYWP30_00735
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RuvB_N AAA_assoc_2 AAA_22 AAA_14 AAA_16 AAA_3 AAA_18 DNA_pol3_delta AAA_24 AAA_5 Rad17 AAA_25 AAA_2 ResIII DEAD Mg_chelatase AAA_28 nSTAND3 PhoH AAA_11 RNA_helicase AAA_19 SLFN-g3_helicase AAA_30 AAA_33 AAA_7 ATPase_2 TIP49 bpMoxR AAA_17 Parvo_NS1 DUF815 Viral_helicase1 Gp44_lid TPR_16
Other DBs
NCBI-ProteinID: AKT34381
UniProt: A0A0K1E0I4
LinkDB
Position
complement(646575..647537)
AA seq 320 aa
MSELFWFEKYRPRSFDEVVDLEEVKVRLREFVKGGNMPHLLFYGPPGTGKTTMALVLARE
LYGEYWRENTLELNASDERGINVIRERVKEFARTAPVGKAPFKLVILDEADNMTSDAQQA
LRRIMEIYAQNTRFILLANYVSGIIEPIQSRVVMFRFNPLPKDAVIARLRYIAENEGVKI
TNDALEAIYEFTQGDMRRAINALQIAAAVNKEVTEEVVAKALGMVSPRLIREALHEAVNG
SFAKAITQIYGFVVDGGVGELEIIKQIHREVLRLDVPEYVKPDLAYIIAEAHYATLRGAR
GLIQIYGALAKIKQLLKAGL
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagtgaattattttggtttgagaagtatcgtcctcgttcgtttgatgaggtggtggat
ttggaggaggttaaggttaggcttagggagtttgttaaggggggtaatatgccgcatttg
cttttctacggcccgcctggcactggcaagactactatggcgcttgtgttagctagggag
ctttatggggagtattggcgggagaatactcttgagcttaacgcctctgacgagaggggg
ataaacgtaattagagaacgtgttaaggagttcgccagaacggcgcccgtgggcaaagcc
cccttcaaacttgtaatactcgacgaagcagacaacatgaccagcgacgcccaacaagcg
ctgaggcgcataatggaaatatacgcccaaaacacaagattcatactactagcaaactac
gtaagcggcattattgagcctatccaatcccgcgtggttatgtttagatttaacccgctt
ccaaaagacgccgtaattgcgaggctgagatacatcgcagagaacgagggcgttaagatc
acaaacgatgcgttggaagctatctacgagtttactcaaggcgatatgaggcgggcgata
aacgcccttcagatcgccgcggctgtgaataaggaagtaactgaagaggtggtggccaaa
gctcttggcatggtaagccctaggctgatacgtgaagcccttcacgaggctgttaatggt
agtttcgcgaaggcgattacgcagatctatggctttgtggtagacggaggcgtcggagag
ctggagattataaaacaaatccaccgcgaggtgttgaggctagacgtgcctgaatacgtg
aagcccgaccttgcatatataattgccgaggcacattacgccacattgcggggagccagg
ggacttatacagatatacggcgcgcttgcgaagatcaagcaacttctaaaggctgggctt
tag

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