Pyrobaculum sp. WP30: PYWP30_01524
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Entry
PYWP30_01524 CDS
T04013
Name
(GenBank) tRNA-intron splicing riboendonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pyw
Pyrobaculum sp. WP30
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyw03016
]
PYWP30_01524
Enzymes [BR:
pyw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PYWP30_01524
Transfer RNA biogenesis [BR:
pyw03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PYWP30_01524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
AKT35146
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All DBs
Position
1342275..1342826
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AA seq
183 aa
AA seq
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MSGVLRGLAVVVEDVELARRLYREAFYGRFLGHDKVKREEVDKVDAPLILALYEALYLAQ
GGRIKIVDEEGREVPHQRLAELGREKIRNFDEIYKIYRYFRDLGYVVKSGLKFGALFSVY
EKGPGIDHAPMVVVFLEPDKGISATDITRGGRLGHSVKKTFTLATVLRQTGEVVLLGFSW
AKL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagtcctcaggggactcgccgtagtcgtggaggacgtagagcttgcccggagg
ctctacagggaggcgttctacgggaggtttctaggccacgacaaggtcaagagagaggag
gtggataaggtcgacgcgccgctgatcctggcgctgtatgaagctctatacctcgcacaa
ggaggcagaataaaaatcgtagatgaagaaggcagggaggtgccgcaccagcggcttgcg
gagctcggcagagagaagattaggaacttcgacgagatctacaagatctacagatacttc
cgggacctgggctacgtggtcaagagcgggcttaaattcggcgccttgttctcagtctac
gagaagggcccggggatagaccacgcgccgatggtcgtggtgtttctagaacccgacaaa
ggcatctcagccacagacatcacacgtggcgggaggctgggccacagcgtaaagaagacc
ttcaccctggccacggtgttgaggcagaccggcgaggtggtgctcctcggcttctcctgg
gccaaactttaa
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