KEGG   Pyrobaculum sp. WP30: PYWP30_01594
Entry
PYWP30_01594      CDS       T04013                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pyw  Pyrobaculum sp. WP30
Brite
KEGG Orthology (KO) [BR:pyw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyw03400]
    PYWP30_01594
Enzymes [BR:pyw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PYWP30_01594
    5.6.2.6  RNA 3'-5' helicase
     PYWP30_01594
DNA repair and recombination proteins [BR:pyw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PYWP30_01594
SSDB
Motif
Pfam: DEAD DEAD_assoc WHD_Lhr Helicase_C ResIII AAA_25 Cas3-like_C_2 AAA_19
Other DBs
NCBI-ProteinID: AKT35212
LinkDB
Position
complement(1404077..1406863)
AA seq 928 aa
MAFHLLHPLIQEALRERGIEEPTEPQKMAIPEILEGRNVLIIAPTGSGKTEAAMLPILSK
MLEQGVEKPGIYVLYITPLRALNRDLLDRIRWWGERVGFRVDVRHGDTDKADRQRQSKTP
PHILITTPEMLQAILTGRRLLEHLKELRWVVVDEVHELAEDKRGVQLSIALERLRHHIGR
DFQIVGLSATVGSPVEVAKFLVGNDRPFKVVLVNFTRYMQLDVVRPEPTQRDYKLAESSG
FHPDVVARLRIIKELVEENRSTLIFVNTRSMAELLGFRLSYLFGDLPAAVHHSSLSKMVR
ISVEDRLKRGELKAVVATSSLELGIDIGHVDLVIQYISPHQVTRLLQRVGRSGHRLSAVP
KGVIIGEDVNDVMESMVIVKRARDGLIEPTQIPHKPYDVLVNQVVAFLLLKPRWKLEELY
SVIKKAHPYRDLTLEELRRVVKFMQDLYPRLAMYFEDSDTVTRPRGRGFYRYFYETLSMI
PDERQYAVINANTGELVGTLDESFVAEYGNVGIKFIFRGRPWLIAGIEERSIKVVEVSDP
TGAIPSWVGEEIPVPFEVAQQVGALRREIHKGADPRAVAEEFGVSEETAKFVAEELAKHN
GPVPDDRTVVIEQFRDNVVIIHAAFGTQVNRTLGKLLGELLIKLLEKPVGVHQDPYGIII
QFSEPLPAELVGEQIRRLTALDVHEVAELIRSALVKSGSFKRRILHVAKRMGAVDKEADV
YSVSMSKLVEAFSGTPVFDEALRETLERELDLGHTAEVIQRIKTGEIAVVYVEGPTYLGE
VLYEKLSHRLEIIPPERLRRLVLDSTKARLLNYTMLAACLECGWYGMIRVGEVSELRCPR
CGGTNVGVLRSVRTDNLEREVKRGYEEIRRTAEVLRAHGWVGLYALASRLPIEAVEEVLR
ELDGADLNKLTEQLQHAEREHLKQRLLD
NT seq 2787 nt   +upstreamnt  +downstreamnt
gtggctttccacctgcttcacccgctgattcaagaggccttgagggagagggggattgag
gagccgaccgagccacagaaaatggccatacctgagatactggagggccgcaacgtgctg
atcatcgcgcctacgggaagcggcaagacggaggccgcgatgttgcccatcttgtctaag
atgcttgagcagggggttgagaagcccggcatctacgtgctgtatataactccgcttagg
gcgctcaacagggacctcctcgacaggattaggtggtggggcgagagggtcggcttcaga
gttgatgtgagacacggcgatacggataaggccgacaggcagaggcagagcaagacgccg
ccacacatattgataaccacccccgagatgttgcaggctattttgacgggccgccgcctg
ttggagcatctgaaggagcttaggtgggttgtcgtcgacgaggttcacgaactcgccgag
gacaagaggggcgtccagctgagcatagcgctggagaggctgagacaccacatagggcgc
gacttccagatagttgggctttcagccacggtggggagcccggttgaggtggccaagttc
ctcgtggggaacgacaggcccttcaaggtcgtgctggtaaacttcacccggtatatgcaa
ctagacgtggtgaggccggagcccacacagcgggattacaagctggctgaatcctcgggc
ttccaccccgacgtcgtcgcccgcctccgtatcattaaggagctggtggaggagaacagg
agcacgcttatatttgtcaacaccaggagcatggccgagctcctcggcttccgtctctcg
tatctcttcggcgatctgccggcggctgtacaccactcctctctctccaagatggtccgt
atatccgtggaggacaggctgaagaggggtgagctgaaggccgttgtggccacgtcgagc
ctcgagctgggcatagacataggccacgtggacctcgtaattcagtacatctcgccgcac
caggtgacccgcctccttcagagagtcggcagaagcggccacaggttgtcggctgtgccg
aagggcgtcataataggcgaggatgtaaacgacgtgatggagtccatggttatcgtgaag
cgggcgagggatggcttaattgagcctacgcagatcccgcacaagccctacgacgtgttg
gtcaaccaggtggttgcctttctactactcaagccgcggtggaagctggaggagctctac
agcgtcataaaaaaggcgcatccatacagagacctaaccctcgaggagctcaggagggtg
gtcaagttcatgcaggacctctaccccaggctagccatgtatttcgaagacagcgacacc
gtgacgaggccgaggggccgcggcttctaccgctacttctacgaaacgctttctatgatc
ccagacgagaggcagtacgccgtaatcaacgccaacacgggggagctcgtcgggacgcta
gacgagtccttcgtggctgagtacggaaacgtggggatcaaattcatattccgcggcagg
ccctggcttatcgcgggaatagaggaaagaagcataaaggtggtggaggtgtcggatccc
accggggcgatccccagctgggtgggggaggagatacctgtgcccttcgaggtggctcaa
caagtgggcgccctgcgcagggagatacacaaaggcgcagacccccgcgcagttgccgag
gagttcggcgtcagcgaagaaaccgccaaattcgtggcggaggagctcgccaaacacaac
ggccccgtccccgacgacaggacggtggttattgagcagtttcgagacaacgtggtgatc
atccacgcggcgtttggcacccaagttaaccgcacgctggggaagttgctgggcgagcta
ctcataaagctgctggagaagcccgtgggggtccaccaagacccatacggcataattatc
cagttctcggagcctctgcccgccgagcttgtaggcgagcagatacgccggctcaccgcc
ctagacgtccacgaagtagccgagctgataaggtccgccctcgtcaagtccggctccttt
aagcggaggatcctccacgtggccaagaggatgggggctgtggacaaggaggcagacgtc
tacagcgtaagcatgtcgaaactggtggaggccttcagcggaaccccggtcttcgatgag
gccctgagggaaactcttgaaagagagctggacctgggccacacggcggaggtgatacag
cggataaaaacaggcgaaatagcggtggtgtacgtagaggggcccacctacttgggcgag
gtgctttacgaaaagctttcacacaggcttgagataatcccaccggagaggctcagaagg
cttgtgctagacagcaccaaggcccgcctgctcaactacactatgctggccgcatgtcta
gaatgcgggtggtacggcatgatacgcgtgggcgaggtgtcggaactacggtgtccgcgt
tgcggtggtacaaacgtaggagttctgcggtccgtcagaacagacaacttagagagagag
gtgaagaggggatacgaagaaatcaggcgaaccgccgaagttctgagggcccacggctgg
gtgggtctatatgccctcgcctccaggctgcctattgaggcggtggaggaggtgctgagg
gagctcgacggcgctgacctcaacaagttgactgagcaactgcaacacgcagaacgcgaa
cacctaaagcaacggcttctcgactag

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