Pyrobaculum sp. WP30: PYWP30_01726
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Entry
PYWP30_01726 CDS
T04013
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pyw
Pyrobaculum sp. WP30
Pathway
pyw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PYWP30_01726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyw03019
]
PYWP30_01726
03009 Ribosome biogenesis [BR:
pyw03009
]
PYWP30_01726
04131 Membrane trafficking [BR:
pyw04131
]
PYWP30_01726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyw04147
]
PYWP30_01726
Messenger RNA biogenesis [BR:
pyw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PYWP30_01726
Ribosome biogenesis [BR:
pyw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PYWP30_01726
Membrane trafficking [BR:
pyw04131
]
SNARE
SNARE associated proteins
Others
PYWP30_01726
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PYWP30_01726
Exosome [BR:
pyw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PYWP30_01726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_14
AAA_22
TIP49
Vps4_C
AAA_28
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
MazE_antitoxin
AAA_24
AAA_17
AAA_7
Sigma54_activat
TsaE
ABC_tran
ATPase
DUF815
AAA_19
Zeta_toxin
NPHP3_N
PhoH
AAA_lid_PRS2_C
Parvo_NS1
AAA_30
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AKT35343
UniProt:
A0A0K1E441
LinkDB
All DBs
Position
1522514..1524730
Genome browser
AA seq
738 aa
AA seq
DB search
MSSEVILRVAEARSRDVGRSIVRIPVRIMKKLGIEPGDYVEIVGRKSAYAQVWPAYPEDE
DKDIVRMDGIIRQNAGVGIGDTVKVRKASLKPAQRVVLAPTEPVRVDPEYLKKQILLGKP
VARGQAIDVPFYGGAIRFVVVQVQPGPAAYVSIDTEVTVREEPAKEAELTIPRVTWEDIG
DLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFV
AINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQ
LLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIHIPMPDKRARREILAVHTRN
MPLCTKADVENKVCNPGDEVDLDKIAEMTHGYTGADLAALAKEAAMAALRKAINKGMINI
EQDVIPQEVLTKLKVGMTDFMEAMKYIHPTVLREVIIEVPEVHWDDIGGYDAIKQELREI
VEWPMKYRHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWV
GESEKAIREIFKKARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGT
LKGVVVMAATNRPDILDPALLRPGRFDRIIYVPPPDIKARAEIFKVHTKKIKLSSDVNLE
ELAKRTEGYTGADIAAVVREAAMLALRETIKERTPSAKPVSTRHFEEALKRIPPSLGPDD
VKRYEEMAKKLRRAIAGL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaggttattctgagggtcgctgaggccaggtcgcgggacgttgggcgtagt
attgttaggatacctgtgcgtattatgaagaagctcggcatcgagcctggggattacgtg
gagattgtggggaggaagagcgcatatgcccaggtgtggcctgcctacccggaagacgaa
gacaaggacattgtcaggatggacggcataattaggcaaaacgccggagtgggcataggc
gacacggtgaaggtaaggaaggcttctctgaagcccgcccagagggttgtgctggccccc
acggagcccgtccgcgtggatccggagtatctcaagaagcagatactcctcggcaagccg
gtggccagggggcaggcaatagacgtccccttctacggaggcgccataagattcgtcgta
gtccaggtacagccagggccagccgcatacgtctcaatagatacagaagtgacggtaaga
gaagagcctgcaaaagaggctgagctcacaataccgagggtcacctgggaggatattggt
gatttggaggatgctaagcagaagattagggagttggtggagcttccgcttcggcatccg
gagctttttaagcatcttggtattgagccgccgaaggggattcttcttattgggccgccg
gggacggggaagacgcttttggctaaggctgtggctaatgaggctaacgcctacttcgtc
gccataaacgggcctgagattatgtcgaagtactacggggagtctgaggcgaggctgagg
gagatcttcgaggaggcgaagaaaaacgcccccgccataatcttcatcgacgagatagac
gccatagcgccgaagcgggaggaggtgacgggagaagtggagaaacgcgtcgtggcgcag
ctactaaccctcatggacggcctacaagaaagaggacaggtagtggtaataggagccacc
aacagaccagacgcagtagacccagcactaagaagaccaggaagattcgacagagagata
cacatccccatgccggataagagggctaggcgggagatacttgcggtccacaccaggaac
atgccgctctgcaccaaagcagatgtggaaaataaagtttgcaacccaggcgacgaagtt
gacctagacaaaatcgcggagatgacccacggctacacaggtgcggacctagccgcgctt
gcgaaggaagcggcaatggcggcgttgagaaaggcgataaacaaggggatgataaacatc
gagcaagacgtcatcccgcaggaggtccttaccaagctgaaggtgggcatgacggacttc
atggaggccatgaagtacattcaccccaccgtgttgcgcgaagtcatcatagaggttccg
gaggttcactgggacgacatcggcggctacgacgccataaagcaggagctgagagaaata
gtggaatggcccatgaagtaccgccactacttcgacgagttgggcgtggagccgcctaag
ggcatcctgctgtttggcccgccgggcgtcggcaaaacgctcttcgccaaggccgtggcg
actgagtcaggcgccaacttcatagcagtaagagggcccgagctcctctccaagtgggtt
ggcgagtcagagaaggctatccgcgagatatttaagaaggcgcgtatggcggcgccctgt
gtggtcttcttcgacgagatagactcaatagcgccagccagaggctccagactcggcgac
tcaggcgtgacagatagaatggtcaaccagttgctggctgagatggacgggataggcacg
cttaagggcgtggtggttatggcggccacaaacagacccgatattctcgaccccgcattg
ctgaggccgggccgtttcgacaggataatctacgtgccgccgccggacatcaaggcaagg
gctgaaatattcaaggtacatacgaagaagatcaagctctccagcgacgttaacctagag
gagctggccaagagaacggagggatacaccggcgccgatatagcggcagttgtgagggaa
gcagcgatgctcgccttgagagaaactataaaggagagaaccccatccgcgaagcccgtc
tccacgagacacttcgaagaggcgctgaagagaataccaccgtccctaggccccgacgac
gtcaagcgctacgaggaaatggccaagaaactcagaagggcaattgctggcttataa
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