Pyrobaculum sp. WP30: PYWP30_01789
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Entry
PYWP30_01789 CDS
T04013
Name
(GenBank) putative RNA-binding protein, contains THUMP domain
KO
K06963
tRNA acetyltransferase TAN1
Organism
pyw
Pyrobaculum sp. WP30
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyw03016
]
PYWP30_01789
Transfer RNA biogenesis [BR:
pyw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PYWP30_01789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOUT_MTase_2
THUMP
Motif
Other DBs
NCBI-ProteinID:
AKT35405
LinkDB
All DBs
Position
complement(1566810..1567907)
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AA seq
365 aa
AA seq
DB search
MSSMSGVDLIIKTRKEFERVAASHIKELLGPGAEAVSAPWGYLGIVFVKGIGADRWKAAE
LIAEKIPEVDRVLVVEEAVKADLPEIEKAAVEVARRYIQSGDTFAIRTTRRGRHGFTSID
VNVRVGAAVKEATGAEVDLEEPTKPLYIEIFQDTAAICVPATREYKKLRRDKPLPLQFFR
KVAIGQLVYEGDEEAVRKMGERIGRAVQTFEVGELAILLHKPMPSKSLGTFLEAVEAGIE
SRYQIQVRSYGRPVWKVPVYVYELYQYIRSREGEPIVVTDPKGDYITHVKEELAQLFRRD
RVNVLIGSREGIPTGVFRLASLVVDLVPEVTIATDFVVPSLAVALVSALEEAGALPRYVG
KRRKH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatgtctggggttgatttgataattaagacaaggaaagaattcgagagggtc
gcggcgtcgcatatcaaggagctcctaggccccggggcggaggcggtgtctgccccctgg
ggctacctcggcattgtctttgtgaaggggatcggggcagataggtggaaagccgctgag
ttgatagctgagaagatccccgaggttgatagggttctggtggttgaggaggcggtcaag
gcggatctacccgagatagagaaggcagcggtggaggtcgcgaggcggtatatacagagc
ggagacaccttcgcgattaggacgacaaggagaggcaggcacggcttcacctccattgac
gtaaacgtgagagtcggcgcagctgtgaaggaggccaccggcgccgaggtggatttagag
gagccgacgaagccgctgtatatagaaatatttcaagacacggccgccatatgtgtgccg
gctaccagggagtacaagaagctgaggcgcgacaagccgctacccctgcagttcttcaga
aaagtcgccataggccagctcgtgtatgaaggcgacgaggaggctgtgcgtaagatgggc
gagaggatcggcagggctgtccagaccttcgaggtgggggagctggcgatcctcctccac
aaacctatgcccagcaagtctctagggacgtttctagaggctgtagaggcgggcatagag
agcagataccagatacaagtcagaagctacggcaggccggtttggaaggtcccggtctac
gtgtatgagctgtatcaatacatccgtagcagagagggggagcccatagtggtgacggac
cccaaaggcgactacataacccacgtaaaggaggagctggcccagctcttccgccgagac
cgcgtaaacgtgctgataggctcccgagaggggataccaaccggcgtcttccgcctcgcc
tcgctggtcgtcgacctggtgccggaggttacaatcgccacagacttcgtggtgccgtct
ctggctgttgcgctggtcagcgcgctggaggaggccggcgccctcccacgctacgtcggc
aagcggagaaaacattaa
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