Pyrobaculum sp. WP30: PYWP30_01957
Help
Entry
PYWP30_01957 CDS
T04013
Name
(GenBank) RecF/RecN/SMC N terminal domain
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pyw
Pyrobaculum sp. WP30
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyw03400
]
PYWP30_01957
DNA repair and recombination proteins [BR:
pyw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PYWP30_01957
Archaeal homologous recombinant proteins
PYWP30_01957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_13
AAA_15
AAA_21
ABC_tran
AAA_29
AAA_27
EzrA
COG6_N
FapA
CCDC22_CC
MukB
SbcC_Walker_B
Rad50_zn_hook
DNA_ligase_ZBD
KAR9
GAS
V_ATPase_I
Snapin_Pallidin
FPP
BAR_4
XhlA
ATPase_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AKT35573
UniProt:
A0A0K1E4V3
LinkDB
All DBs
Position
complement(1705203..1707311)
Genome browser
AA seq
702 aa
AA seq
DB search
MIKKIEIVNFKAYAKASFRFGEGVNFIYGANGAGKTSLMEAISVALFGSQWVRWSGREWS
HFLRRGAAWGEVKLYISHGGREIVVVRRFSEKGTVSSGTYLALDGGVVARGDLDVTATLV
SKLGLRLDEYANLLYIRQGELRRIFQDTKYIDRIFRLDEFDDVDEVVKDVHDEFRARRER
VGGRLEELERRLPVLRSRLDDLRRRLEEAERRAAELEEAAARFREVERRYLELRERYVSL
AKEREALEKKLDEAAQLALNAEKDVEQLEAELEAVRKAAEELKSLPEVGDVEAEYFELRQ
AVATAERVPPEVRSYDPRSLEEARRRLEEASRRHGEVKTRLALLRDVLRLAQRAEGGRCP
VCGSPLSRDAVQRHELEVLGLEKEEQRLSKLIDQLKAEVRRLEELDRLYHSYKPHLALDV
PSARRRLAELEALYQKKKEVEKRRAYLTAQAAREAEVARRLEELKARKAEAERKIHEVNQ
RLGGLEAELTAAAEALKRLEAEYAALKTKHEEYLAARSVAAELRRQIAETEKELTTLAGE
LEKAKADAERLDKALAAARQIRVVLGELKPLMRQTLLKAINEELNAVFLRLRHKEAFKSL
QLVETDGRYAVRVNTPTGPIDHGLLSLGEQNLVALSLRVALARALLGQAPFMMFDEPTEH
LDEEHRRKIVELVRGLTSIVPTIIVTSHLGEFEEVADVVIQL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaagatcgagatcgtaaacttcaaggcatacgccaaggcctcttttaggttc
ggcgagggcgtcaacttcatctacggcgccaacggcgctggcaagacttcgcttatggag
gccatctctgtggcgctcttcggatcgcagtgggtgaggtggagcggcagggagtggagc
cacttcctcaggagaggcgccgcgtggggcgaggtgaagctgtacataagccacgggggc
cgggagatcgtcgttgttaggagattcagcgaaaaggggacggtctcctccggcacctac
ctggcgctggacggtggcgtggtggcgcggggcgacttagacgtcacggcgactcttgtc
tcgaagctgggccttaggctggacgaatacgcaaatcttctctacatccggcagggagag
ctgaggaggatattccaggataccaagtacatagaccgcatcttccgcctcgacgagttc
gacgatgttgacgaggtggtaaaggatgtgcacgacgagtttagagctcggcgggagcgg
gtgggcggccggctggaggaactggagaggaggctccccgtgttgaggagcaggctggac
gacttgcggcggaggctggaggaggccgagaggagggcggcggagctggaggaggcggcg
gcgcggtttagagaggtggagagacgctacctggagcttagggagcggtacgtctctctg
gctaaggagagggaggctctggagaagaagctggatgaggcggcccagctggcgcttaac
gccgagaaagacgtggagcaactggaggctgagctggaggctgttaggaaggcggcggag
gagctgaagagcctccccgaggtgggcgacgtggaggcggagtatttcgagcttcggcag
gcggtggctacggcggagagggtcccccccgaggtgaggagctacgaccccaggtctctt
gaggaggcccggcggaggctggaggaggcgagtaggagacatggtgaggtgaagacgcgg
ctggctcttctacgcgatgtgctccgtctggcccagcgggcggagggcggccggtgtccg
gtgtgtgggtcgccgctttctagagacgccgtccagcggcacgagttggaggtgctgggt
ctggagaaggaggagcaacgcctctcgaaactcatagaccagctcaaggccgaggttaga
cggctggaggagctggacaggctttaccacagctacaagccccacctggctctagacgtc
ccatcagcgcggaggaggctggccgagctggaggccctataccagaagaaaaaggaggtg
gaaaaaaggcgggcgtacctcacggcgcaggcggctagggaggcggaggtggcgaggcgg
ctggaggagctgaaggcccgtaaggccgaggcagaaaggaagatacacgaggtcaaccag
aggctggggggactggaggcggagctgaccgcggccgcagaggccttgaagaggctggag
gctgagtacgcggcgcttaagacaaaacacgaggagtacctcgccgcgaggtctgtggcg
gctgagctcaggaggcagatagccgagactgagaaggagctgaccaccttagcaggcgag
ctggagaaggccaaggccgatgcagagagactcgacaaggccctcgccgcggcgaggcag
ataagagtcgtcctcggcgagctcaagcccttgatgcgtcagacgttgctcaaggccata
aacgaggagttaaacgccgtcttcctccgcctcagacacaaagaggcgtttaaatcgctc
cagctggtcgagacagacgggaggtacgcggtccgcgtcaacacccccacaggccccata
gaccacggcctcctgtcactgggggagcagaacctcgtcgccctctcgctgagggttgcc
ctggcgagggccctcctcggacaagccccatttatgatgttcgatgaacccacagaacac
ctagacgaagaacacagaagaaaaatcgtagaattagtaagaggactcacgtcgatagtc
cccacaatcatcgtcacctcccacctaggcgaatttgaggaagtagcagacgtagtcatc
caactataa
DBGET
integrated database retrieval system
