Pyrobaculum sp. WP30: PYWP30_02226
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Entry
PYWP30_02226 CDS
T04013
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pyw
Pyrobaculum sp. WP30
Pathway
pyw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYWP30_02226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyw03021
]
PYWP30_02226
Enzymes [BR:
pyw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYWP30_02226
Transcription machinery [BR:
pyw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PYWP30_02226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HHV-5_US34A
Zn_ribbon_ZPR1
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
AKT35837
LinkDB
All DBs
Position
1947436..1950090
Genome browser
AA seq
884 aa
AA seq
DB search
MSLREELDTIPRKVIKSIKFGVLSPEIIRKYSVMEVTTSEVYDEGGLPVRGGIADRRLGV
AEPGSRCETCGQTHDVCPGHFGHIELVKPVVHVEFARVIYDVLRATCPNCGRIMLRDEEA
RRYRERLTKLRGRWRLLALNLHEKIRKKASERTTCPHCGYKRNKIRFERPYYFYEETESG
ALVKLDPEVLRDRLAKVPGEDLELLGFNPSVARPEWAILKVLPVPPPHVRPSIQLETGIR
SEDDLTHKLVDIIRMNEKLKIAIETGAPTNVVDNLWDLLQYHVATYFDNELPGIPVAKHR
GGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTVISPDPHISINEVGVPVDIAKVLTVP
ERVTTWNVDVLREYVIRGPEAWPGANYVVTPEGRRIDLRYVKDRKTLADRLAPGWVVERH
LRDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRLHLAVCPPYNADFDGDEMNLHVPQTE
EARAEARTLMLVEKHIITPRYGGAIIGARQDYIIGAYLLSHKSTFLTKKEVAFLLGAGKS
AEDPPEPAILHPVELWTGKQIISHFLPKDLNWVQPTAFKSRCQDAYRCFGDEWIIVVNGN
LVKGVLDKKSIGAEQVDSLWHRVARDYPPEVARQWLDSSLRLFLRFLDLRGFTFGMDSIY
LPPESYKELDELIEESLKKADELIEEFRSGRLEAMPGFTVEETFENKVTEIMSRVREDAA
TVVERYIRKDAEGYLMAKTGARGSIVNIVQMVATLGQQTIRGERIRRGYRTRTLPHFSTG
DIGPYAGGFVRRCFRCGLSPVEYFFHAAAGRDGLIDTAVRTAQSGYMQRRLINALQDAYT
AYDGTVRFGGETLLQMLYGEDGVDVSRSDHGKIADIKSLKLWIR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttaagggaggaactcgacactatcccccgaaaggtgattaaatctattaagttc
ggggtcctcagccctgagatcatcaggaagtactccgtgatggaggtcaccacctctgag
gtgtacgacgagggcggcctcccagtgaggggcggcatcgcggaccgcaggctcggcgtc
gccgagcccggctcgcggtgtgaaacctgcggccagacacacgacgtgtgtccaggccat
tttggacacattgagctggttaagccagttgtccacgtggagttcgcgagggtaatctac
gacgtgttgagggcgacttgccccaactgcggccgcattatgttgagggatgaggaggct
aggcggtatagggagaggcttacgaagctcagggggcgttggaggcttctagccctgaat
ctccatgagaagatacgcaagaaggcttccgagaggacgacttgcccccattgtgggtat
aagaggaataagataaggttcgaaaggccttactacttctacgaggagactgagagcggg
gccttggtgaagctggaccccgaggtgttgagggatagacttgccaaggtccccggggag
gatctagagctgttgggcttcaacccgtctgtggccaggcctgagtgggctattttgaag
gttctgcccgtgccgccgcctcacgtcaggccttctatacagcttgaaactggcataagg
tctgaagacgacctcactcacaaacttgtcgatattatccgtatgaatgagaaattgaaa
atagctattgaaactggcgccccgactaatgtcgttgataacttgtgggatttattgcag
tatcatgtcgccacctactttgacaacgagctccccggcatacctgtggctaaacacaga
ggcgggaggccgcttaagggcatcgcccagagacttaaggggaaggaggggagattcagg
ggctccctctccggcaagcgcgtcaacttctcggcgcgtaccgtcatcagccccgacccc
cacataagtatcaacgaggtcggtgtgcctgtggacatagccaaggtgctgacagttccg
gagagggtgacgacttggaacgtggacgtcctccgcgaatatgtaataaggggccccgag
gcttggccgggcgccaactacgtggtgacgccggagggcaggaggatagatctgcgctac
gtgaaggataggaagacgcttgcagatagactcgccccaggctgggtcgtggagagacac
ctacgagatggggacatagttctgtttaaccgccagccgagtctccacagggtgtccatg
atggggcacctggtcaaggtgttgccggggaggacctttaggctccacctagccgtgtgt
ccgccgtataacgccgacttcgacggagacgagatgaacctacacgtgccccagactgag
gaggcccgggctgaggcgcggactttgatgcttgtggagaagcacataattaccccgcgc
tacggcggcgccataatcggcgcaaggcaggactacatcataggcgcctacctcctctcg
cacaaatcaaccttcctcaccaagaaggaagtcgccttcctgctgggggcgggaaaatcc
gctgaggacccgcccgagcccgccattctgcaccccgtggagctgtggacaggcaagcag
attatttctcacttcctcccgaaggacctcaactgggtgcagccaacggcctttaagagc
aggtgccaagacgcgtataggtgttttggcgacgagtggattatcgtcgtcaacggtaat
ttggtgaagggggtgttggacaagaagtccataggcgctgagcaggtagactccttgtgg
cacagggtagcccgcgactacccgcctgaggtcgccaggcagtggctggactcctccctg
aggctgtttctcaggttcctggacctcaggggcttcaccttcggcatggactccatatat
ctgccgccggagtcctacaaagagctagacgagctaattgaggagagtctgaagaaggca
gatgagctgattgaggagtttagaagcggccgtctggaggctatgccaggcttcactgtg
gaggagacctttgagaacaaggttaccgagataatgtctagagtgcgcgaagacgcggct
actgtagtggagagatacatacgcaaagacgcagagggctacctcatggctaagaccggc
gccagaggtagcatcgtgaacatagtccagatggtcgccacgctggggcaacagacaata
aggggcgagcgcattaggcggggctacaggacaaggactctcccgcacttctcgacaggc
gacataggcccctacgcaggcggcttcgttaggaggtgctttagatgcggcttgtcacct
gttgagtacttcttccacgcggccgccggcagagacggcttgatagacaccgcggtgcgt
acggcgcagtcaggctacatgcagagacggctgatcaacgctctacaagacgcatacacg
gcctacgacggcactgttaggttcggcggcgagacgctgttgcagatgctctacggcgaa
gacggggtcgacgtaagccgctcggaccacgggaagatagccgatataaagtcgttgaaa
ctctggataagatga
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