KEGG   Pyrobaculum sp. WP30: PYWP30_02250
Entry
PYWP30_02250      CDS       T04013                                 
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pyw  Pyrobaculum sp. WP30
Pathway
pyw03030  DNA replication
pyw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pyw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PYWP30_02250
   03410 Base excision repair
    PYWP30_02250
   03450 Non-homologous end-joining
    PYWP30_02250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyw03032]
    PYWP30_02250
   03400 DNA repair and recombination proteins [BR:pyw03400]
    PYWP30_02250
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pyw04147]
    PYWP30_02250
DNA replication proteins [BR:pyw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PYWP30_02250
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PYWP30_02250
DNA repair and recombination proteins [BR:pyw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PYWP30_02250
Exosome [BR:pyw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PYWP30_02250
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AKT35861
LinkDB
Position
1968434..1969474
AA seq 346 aa
MGVTELGKLIGREARREIKLENLAGRCVALDAYNALYQFLASIRQPDGTPLMDRAGRVTS
HLSGLFYRTINLLEAGIKPVYVFDGKPPEFKLAEIEERRRVKEKAMEEVVKAIKEGRREE
VAKYMKRAVFLTSEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDS
LLFGSPRLVRNLAVSPKRRVGEEVVEVSPELVELDAVLKMLRLKNREQLIDLAILLGTDY
NPEGVPGVGPQKALKLVWEFGSLEKMVETVLKGISFPVNPIEIKRFFLNPPATDNYSVEF
KKPDEHALVGFLVGEHDFSEDRVQKALERLQKAQGKLKTSSLDSFF
NT seq 1041 nt   +upstreamnt  +downstreamnt
gtgggtgttaccgagttgggtaaactaatcgggagggaggctaggcgagaaataaagctc
gagaacctcgccgggaggtgcgttgcgctggacgcctacaacgcgttgtatcaattcctc
gcctctatacggcaaccagacggaacccccctcatggaccgcgctgggagggtcacaagc
cacctctcggggcttttttaccgcaccataaacctcctcgaggccgggataaagcctgtg
tatgtcttcgacgggaagcccccagagtttaaacttgccgagatagaggagaggagaagg
gtgaaggagaaggcaatggaggaggtggttaaggcgataaaggagggtaggagagaggaa
gtggcgaaatacatgaagagggctgtgtttctcaccagcgagatggtggaggacgccaag
aggttgctgacctacatgggcgtgccgtgggtgcaggcgccgagcgagggggaggcacag
gccgcccacatggccaagaggggacattgctgggctgtgggtagccaagactacgactcg
ctcctctttggctcccctaggctcgtgcgcaaccttgcggtttctcccaagaggagggtg
ggggaggaggttgtggaggtctcgcctgagttggtggagctagacgccgttttgaagatg
ctgagactgaagaacagggagcaactcatcgacttggctattctgctggggaccgactac
aacccagagggggtccctggggttgggcctcaaaaggcgttgaagctggtgtgggagttt
gggtccttagagaagatggtggagaccgtccttaagggcatctccttcccggtgaacccc
atagagataaagagattcttcctaaatccgcctgcgactgataactactccgtggagttt
aaaaaacctgatgaacacgcgcttgtaggtttcttagtcggcgaacacgacttcagcgag
gacagagtccagaaggcgcttgagaggctacagaaggcgcaggggaagctgaagacctcc
tcactagactcattcttctag

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