KEGG   Pyrobaculum sp. WP30: PYWP30_02276
Entry
PYWP30_02276      CDS       T04013                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
pyw  Pyrobaculum sp. WP30
Pathway
pyw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pyw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PYWP30_02276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyw03032]
    PYWP30_02276
DNA replication proteins [BR:pyw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PYWP30_02276
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N RCF1-5-like_lid AAA_16 AAA_14 AAA_22 AAA_assoc_2 AAA_18 AAA_3 AAA_25 Rad17 AAA_24 AAA_5 AAA_2 Mg_chelatase ResIII DEAD AAA_28 AAA_33 nSTAND3 AAA_19 AAA_11 DNAX_ATPase_lid RNA_helicase SLFN-g3_helicase Cdc6_lid TIP49_C AAA_7 AAA_30 ABC_tran TIP49 AAA_17 bpMoxR UBA_Rad5 NPHP3_N ATPase_2 Parvo_NS1 DUF815 IstB_IS21 Viral_helicase1
Other DBs
NCBI-ProteinID: AKT35887
UniProt: A0A0K1E5B5
LinkDB
Position
1990664..1991653
AA seq 329 aa
MAELFWFEKYRPRSFDEVVDLEEVKVRLREFVKGGNMPHLLFYGPPGTGKTTMALVLARE
LYGEYWRENTLELNASDERGINIIRERLKEFARTAPVGKAPFKLVILDEADNMTSDAQQA
LRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPLPRHLMAERLRHIAEREGVTL
KEDAVDVIYELSEGDMRRAINLLQIAAATNKVVDGNAVAAAATAVRPSDIVELFNLALNG
DYLKAREKLRELMYIKGVAGVDFIRAFQRELIRMSLDDEVKAEVAELLADVDYRLTQGAD
EEIQLAYLLARLGAIGRRAKPTAPPPKKR
NT seq 990 nt   +upstreamnt  +downstreamnt
atggctgagctcttctggtttgagaagtatcgtcctcgttcgtttgatgaggtggtggat
ttggaggaggttaaggttaggcttagggagtttgttaaggggggtaatatgccgcatctg
cttttctacggcccgcctggcaccggcaagactactatggcgcttgtgttggctagggag
ctctacggggagtattggcgggagaatactcttgagcttaacgcctctgacgagaggggg
ataaacataattagagaacgcctcaaggagttcgccaggacggcgcccgtgggcaaagcc
cccttcaaactcgtaatactcgacgaagcagacaacatgaccagcgacgcccaacaagcg
ctaagacgcataatggaaatatacgcccaaaacacaagattcatactactagcaaactac
gtttctcgcattatcgaccctataatttctaggtgtgctgtcttccggttctcccccttg
ccgcggcacttgatggcggagaggctgaggcatatagcggagagggagggggtcaccctt
aaagaagacgccgttgatgttatctatgaactttccgagggcgacatgcggagggccata
aatctgttgcagatagccgccgcgactaataaagttgttgatggcaacgcggtcgccgcc
gctgctaccgccgtgaggccttcggatatagtggagctgttcaacttggcgcttaacggc
gactatttaaaggcgcgtgagaagctgagggagcttatgtatataaagggcgtggcaggc
gttgacttcatcagggcgtttcagagggagttgatccgtatgtcgcttgacgacgaggta
aaggccgaggtcgccgagttgctggcagatgtggactacaggcttacgcagggcgccgat
gaggagatacaactggcctaccttcttgcaaggctcggcgccatcggcagaagggcaaag
ccaaccgcgcctccgcctaagaagaggtga

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