Pyramidobacter sp. YE332: RAH42_01015
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Entry
RAH42_01015 CDS
T09677
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyy03032
]
RAH42_01015 (gyrB)
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_01015 (gyrB)
Enzymes [BR:
pyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RAH42_01015 (gyrB)
DNA replication proteins [BR:
pyy03032
]
Prokaryotic type
DNA Topoisomerases
RAH42_01015 (gyrB)
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAH42_01015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WOL40232
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Position
208271..210169
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AA seq
632 aa
AA seq
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MSTQYTAEDIQILEGLDPVRKRPGMYIGDTTTRGLHHCVYEVVDNAVDEALAGFCSEIAV
TLHADQSVSVSDNGRGIPVDPHPSNGRPALEVVLTVLHAGGKFDNHNYKISGGLHGVGVS
VVNALSEWLEVTVYRDGREWHERFERGTPVSGLTGGTPTAKRGTTVTFRPDAEIFDEVTF
SAETLGNRFREMAFLIPGLKFVFVDEAEGKTWTYHYEGGVSEFVAYLNQGKQTLTPKPIV
IRGEKDGVAVEVGFQYTDEYIERLYSFANLINTIEGGTHVAGLRSAITRGINEGARRAGV
LKEKDENLSGDDLREGLTCVLSVKLGNPQFEGQTKTKLGNGNVKGIVDSILYDGILQELE
EDPSVIKPIIEKAIKARQAREAAKKARELVRKSAMSGLSLPGKLADCSSRTAENCEVYIV
EGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARMDKMLGSKEIRVIIQALGCGIGEDFD
IGKLRYNKIIIMTDADVDGAHISTLLLTFFFRHMRELIEKGHIYLAVPPLYRVQVGKKVD
YLYSDKELRKVMDGLAADGKKAAVQRYKGLGEMNPGQLWETTMDPATRLLKQIELDDLAG
ADQYFDILMGDRVEPRRQFIEEHAHEVHNLDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcagtacacagccgaagacatacagattctggaaggtctcgaccccgtccgc
aagcggccgggcatgtacatcggcgacacgacgacgaggggccttcaccactgcgtgtac
gaggtggtcgacaacgcggtcgacgaagcgctggccggcttctgctcggagatcgcggtg
acgctgcacgccgaccagagcgtcagcgtgtccgacaacggccgcggcatccccgtggat
ccgcatccttccaacgggcgtcccgccctcgaggtggtgctgacggtgctgcacgcgggc
ggcaagttcgacaaccacaattacaagatttccggcgggctgcacggcgtcggcgtctcg
gtcgtgaacgcgctttccgagtggctggaggtcacggtctaccgcgacggcagggaatgg
cacgaacgtttcgagcgcggcacgcccgtttccggcctgaccggcggcaccccgacggcg
aagcgcggcacgacggtgacgttcaggcccgacgcggagattttcgacgaggtgaccttt
tcggccgaaacgctgggcaaccgcttccgcgaaatggccttcctgatccccgggctcaag
ttcgtcttcgtcgacgaggccgaaggcaagacctggacgtatcattacgaaggcggcgtc
tcggagttcgtcgcctacctcaatcagggcaagcagacgctgacgcccaaaccgatcgtc
atccgcggcgaaaaggacggcgtggcggtggaagtcggctttcagtacaccgacgagtac
atcgagcggctttactcgttcgccaacctgatcaacacgatcgagggcggaactcacgtg
gccggcctgcgcagcgccatcacgcgcggcatcaacgagggggcccgccgcgccggcgtg
ctcaaggaaaaggacgaaaacctctccggcgacgacctgcgcgaggggctgacctgcgtg
ctttccgtcaagctgggcaatccccagttcgaaggacagaccaagaccaagctgggcaac
ggcaacgtcaagggcatcgtcgattcgattctctacgacggcatcctgcaggagctcgaa
gaggatccgtcggtgatcaagccgatcatcgaaaaagccatcaaggcccgccaggcccgc
gaagccgccaagaaggcccgcgagctcgtgcgcaaatcggcgatgagcggcctttcgctg
ccgggcaagctggccgactgttccagccgcaccgccgagaactgcgaggtctacatcgtc
gagggagactcggccggcggcagcgccaagcaggggcgcgaccgcaagttccaggccatc
ctgcccctgcgcggcaagatcctcaacgtcgagaaggcgcgcatggacaagatgctcggc
agcaaggagatccgcgtcatcatccaggcgctcggctgcggcatcggcgaggacttcgac
atcggcaagctgcgctacaacaagatcatcatcatgaccgacgccgacgtcgacggcgcc
cacatcagcacgctgctgctgacgttcttcttccgccacatgcgcgagctgatcgaaaaa
ggccatatctatctggccgtgccgccgctctatcgcgtgcaggtcggcaagaaagtcgac
tacctctacagcgacaaggagctgcgcaaagtcatggacggacttgcggccgacggcaaa
aaagccgccgtgcagcgctacaagggcctgggcgagatgaatcccggccagctctgggag
acgacgatggaccccgccacgcgcctgctcaagcagatcgagctggacgacctggccggc
gccgaccagtacttcgacatcctcatgggcgaccgcgtcgagccgcgccgccagttcatc
gaagagcacgcccatgaagtgcacaatctggacgtgtga
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