Pyramidobacter sp. YE332: RAH42_01985
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Entry
RAH42_01985 CDS
T09677
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00260
Glycine, serine and threonine metabolism
pyy00460
Cyanoamino acid metabolism
pyy00630
Glyoxylate and dicarboxylate metabolism
pyy00670
One carbon pool by folate
pyy00680
Methane metabolism
pyy01100
Metabolic pathways
pyy01110
Biosynthesis of secondary metabolites
pyy01120
Microbial metabolism in diverse environments
pyy01200
Carbon metabolism
pyy01230
Biosynthesis of amino acids
pyy01240
Biosynthesis of cofactors
pyy04981
Folate transport and metabolism
Module
pyy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RAH42_01985 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RAH42_01985 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RAH42_01985 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RAH42_01985 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RAH42_01985 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RAH42_01985 (glyA)
Enzymes [BR:
pyy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RAH42_01985 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WOL40419
LinkDB
All DBs
Position
420780..422039
Genome browser
AA seq
419 aa
AA seq
DB search
MDKNSDKYIRDVDAEIADIIIEEYRRQNHQIELIASENFTSRAVMAAMGSVLTNKYAEGY
PAKRYYGGCEVVDKAENLARDRAKKLFGCDHVNVQPHAGSQANMAVYFSQLQPGDTILAM
NLTDGGHLTHGSPVNFSGRLYNVVPYGVSRDTETIDFDQVRELARKHHPKMIVCGASAYP
RIIDASKFREIADEVGALVMFDIAHIAGLVAAGVHPNPVPYCDFVTTTTHKTLRGPRGGM
VMCKEQYAKKLDSAIFPGMQGGPLMHIIAAKAVAFAEALRPEFKTYQQNIVGNCKHLAEK
MMEKGFRLVSGGTDNHLILVDLTSKGVTGKQAQIALDQAGITVNRNTIPFETLSPMVTSG
VRIGTAAATTRGFGREEMEKIAGWIDRVVTHIDDEAEIGKVRAEITELCEAKPLYPGLY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaacagcgacaagtacatccgggacgttgacgccgagatcgccgacatcatt
atcgaagagtaccgccgccagaaccaccagatcgagctgatcgcctccgagaacttcacc
tcgcgcgccgtcatggcggcgatgggctccgtgctcaccaacaagtacgccgaaggctac
cccgccaaacgctactacggcggctgcgaagtcgtcgataaggccgaaaacctcgcccgc
gaccgcgccaagaaactcttcggctgcgaccacgtcaacgtccagccccacgccggcagc
caggccaacatggccgtctacttctcccagctccagcccggcgacaccatcctggccatg
aacctcaccgatggcggacacctcacccacggctcccccgtcaacttctccggcagactc
tacaacgtcgtcccctacggcgtcagccgcgacaccgagaccatcgacttcgaccaggtg
cgcgagcttgcccgcaagcatcatcccaagatgatcgtctgcggcgccagcgcctacccc
cgcatcatcgacgcgtcgaaattccgcgagatcgccgacgaagtcggggccctcgtcatg
ttcgacatcgcccacatcgccggcctcgtcgccgccggagtccatcccaatcccgtgccc
tactgcgacttcgtcaccaccaccacccacaagaccctgcgcggcccccgcggcggcatg
gtcatgtgcaaagaacagtacgccaagaaactcgactccgccatcttccccggcatgcag
ggcggccccctcatgcacatcatcgccgccaaagccgtcgccttcgccgaagccctcaga
cccgagttcaagacctaccagcagaacatcgtcggcaactgcaaacaccttgccgaaaag
atgatggagaaaggcttccgcctcgtctccggcggcaccgacaaccacctgatcctcgtc
gacctgaccagcaaaggcgtgaccggcaaacaggcgcagatcgcgctcgaccaggccggc
atcaccgtcaaccgcaacaccatcccgttcgagaccctgagcccgatggtgaccagcggc
gtgcgcatcggcacggcggcggcgaccacgcgcggcttcggccgcgaggaaatggagaag
atcgccggctggatcgaccgcgtggtcacccacatcgacgacgaagcggagatcgggaaa
gtccgcgccgagatcaccgaactctgcgaggcgaaaccgctctatcccgggctgtattga
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