Pyramidobacter sp. YE332: RAH42_04180
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Entry
RAH42_04180 CDS
T09677
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RAH42_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyy03021
]
RAH42_04180
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_04180
Enzymes [BR:
pyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RAH42_04180
Transcription machinery [BR:
pyy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RAH42_04180
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RAH42_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WOL40842
UniProt:
A0AAU0KDP7
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All DBs
Position
879708..880715
Genome browser
AA seq
335 aa
AA seq
DB search
MRPEIQVEECSSTAARLVIGPLERGYGQTIGNALRRVLLSSIKGAAISAVRVEGAQHEFT
TIPGMKEDVIELLLNLKHVPVRSHSAEYRTLKLDVEGGKKVTAADFQEDSDIEFIDPDAY
ICTLAEGHSLSLEVYIEQGVGYATVDRPRLSYLPVDALMIDAIYSPILRVKYEVQNERVG
QKTDYEKIVMNVTTNGVVAPDIAVAEAAKLLREYFDIVIQELRKLHPAELGLFDDESASQ
PSGNSQAGDGADNPPENALLNKPVRELELSIRSENCLLRGGIHTIGDLVSRSKDDLLKIR
NLGKISLREIEEKMTKYGIVLSDDKASAENSSKED
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgagattcaagttgaagagtgttccagtaccgccgcgcggctggttattggt
ccgctcgaacgcggttatggtcagacgataggtaacgctctccgtcgtgtgctgctttct
tcgatcaaaggagcggcgatcagtgcggttcgcgttgaaggcgctcagcacgagtttacg
acgatccccggcatgaaggaagacgttatcgagctgctgctgaatctcaagcacgtgcct
gtccgctcccatagcgccgaataccgtacactgaagctggatgtggaaggcggaaagaag
gttacggcagccgattttcaggaggacagcgacatcgagttcatagatcccgacgcgtac
atctgcacgctggcggaagggcattcgctttcgctcgaagtttacatcgagcagggcgtc
ggctacgccacggtggatcgtccgcgcctgagctatttaccggtagacgctctcatgatc
gacgccatctattccccgatccttcgcgtcaagtacgaagttcagaacgaacgcgtcggc
caaaagacggactatgaaaaaattgtgatgaacgtcaccacgaatggcgtcgtcgctccc
gatatcgccgtcgccgaagcggcgaaactgcttcgcgagtatttcgacatcgtcattcag
gagcttcgcaagcttcatcccgccgagctcgggctgttcgacgacgaaagcgcgtctcag
ccttccgggaacagtcaggccggagacggcgccgataatccgccggagaatgccctgctg
aacaaaccggtcagggaacttgaactttcaatcagaagtgaaaactgcctgcttcgcggt
ggcattcataccattggcgatcttgtcagccgcagtaaggatgacttgctgaagatccgc
aacctgggcaagatctctcttcgcgagatcgaagagaagatgaccaagtacggtatcgtc
ctcagtgacgacaaggcaagcgcagagaactcaagcaaggaggactaa
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