Pyramidobacter sp. YE332: RAH42_04870
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Entry
RAH42_04870 CDS
T09677
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00220
Arginine biosynthesis
pyy00240
Pyrimidine metabolism
pyy00250
Alanine, aspartate and glutamate metabolism
pyy01100
Metabolic pathways
pyy01110
Biosynthesis of secondary metabolites
pyy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RAH42_04870 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RAH42_04870 (carB)
00220 Arginine biosynthesis
RAH42_04870 (carB)
Enzymes [BR:
pyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RAH42_04870 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
DAP_epimerase
CPSase_L_D3
ATPgrasp_Ter
MGS
GARS_A
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_5
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WOL40973
UniProt:
A0AAU0KEI7
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All DBs
Position
1036051..1040145
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AA seq
1364 aa
AA seq
DB search
MPLDKKLKRVMIIGSGPIVIGQAAEFDYAGTQACRALRALGIEVILVNSNPATIMTDSDI
ADKVYIEPLTVEILKRLIEKERPDGLLSTIGGQNGLTLSMQLARDGWLESKGVRLLGASL
DTIERAEDRQLFKDMLEKIGEPVIPSAIATRLDEAMNFGAKIGYPVIIRPSFTLGGTGGG
IAHSAAEMEQLARRGLEVSPVGQILVERSVAGWKEIEFEMMRDGDDNCIAICSMENLDPV
GVHTGDSIVVAPALTLADREYQLLRSAALRIVRELEVQGGCNVQFALNPGSFEYAVIEVN
PRVSRSSALASKATGYPIAKVSAQIAMGLRLDEIPNAVTGKTSAFFEPALDYVVVKMPRW
PFDKFSSATRTLGPQMKATGEVMAIAPTFEEALLKSLRGAEIGMDSPRLASLKELGDDQL
EACLREPTDQRLSVVYEALGRGVSVDHVHDVTKIDRWFLWKLKKILAVESALQKCGGVLP
DELYAGAKATGFLDRTIEKLSGAKVEKHLAPVYRMVDTCAAEFAAETPYFYAAAPVSGSE
DEAAGFIAHHAGLVASKGTIVVLGSGPIRIGQGIEFDYAAVHCVWALKRLGYTVVMINNN
PETVSTDFDTADRLYFEPLTPEDVMDIIRLERPLGVVVAFGGQTAIKLTKSLSENGVAIL
GTSADAIDAAEDRERFDAILNRCGIDRPRGHGVETLEQALDAARDIGYPVLVRPSYVLGG
QNMIIAYDDESVSNYMRRLLAIGTDGPVLIDKYLEGTEVEVDAVCDGTDVLIPGIMEHIE
RAGVHSGDSIAAYPAWNLSGPVTEKLVESTARIAIELGVKGLVNIQYVIYNNQVYVIESN
PRASRTIPYISKVTGLPLVDIATQVMLATLTPDAPKLRDLPCGTGLYRPSPYCAVKVPVF
SFEKLSGADVQLGPEMKSTGEVLGVGKNLEEALYKGLIAAGYAVRHHEPGGVLISVQDRD
KPEIVELARRLASLGCRLYTTGGTAEYLKSRGIRSASVGKISQGNRDIPYLLDQGRVQYV
LSTSSPDSSERADAQVLRSKAIERRAACMTSLDTARALVDCMVSGYDEGNVELVDMAHLP
ERKRPVHFVKMRCGGNEYIYVDAIRQSVAEPASLSVALCGRRRSVGGDGLVIVAPARGKA
DARMILYDADGTRARIGGNALRGVGKYVYEKLDVKKKDLSIETDDGVKALRLYDRDGEIY
SVEALIGRPDFDPARVPVTLNADGRPVVSQYYSCGGFDDQITCLSLGDPQCVILTDDCDG
AELNVAGPLMERAEIFPEGTNVSCVSVADRHTLRVRTWERRIGETMSCGTSACAAAVVAA
RLGLVDEGEISVRTAGGLLVVRLAPEGVFLIGGVDCDFEGVIEM
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgataaaaaactgaaacgggtgatgatcatcggctccggcccgatcgtgatc
ggccaggccgccgaattcgactatgccggcactcaagcctgccgggccctgcgcgcgctc
ggcatcgaggtgatcctggtcaactccaatcctgccacgatcatgaccgacagcgacatc
gccgacaaggtctacatcgaaccgctgacggtagagatcctgaagcgcctgatcgagaag
gaacgccccgacggactgctctccaccatcggcggccagaacgggctgaccctgtccatg
cagctggcccgggacggctggcttgaatcgaaaggcgtcagactgctgggcgcgtcgctg
gatacgatcgaacgagccgaggaccgtcagcttttcaaggacatgctggagaaaatcggc
gaacccgtcatcccctcggcgatcgcgacccgactggacgaagccatgaacttcggcgcc
aaaatcggttatcccgtcatcatccgcccctccttcacgctgggcggcaccggcggcggc
atcgcccacagcgccgcggagatggagcagctcgcgcgacgcggactggaagtctcgccc
gtggggcagatcctcgtggagcgcagcgtcgccggttggaaagagatcgagttcgagatg
atgcgcgacggcgacgacaactgtatcgccatttgctccatggagaacctcgatcccgta
ggcgtgcacaccggcgattccatcgtcgtggcgccggcgctgacgctggccgatagggag
taccagctgctgcgcagcgcggcgcttcgcatcgtgcgcgagctcgaagtgcagggcggc
tgcaacgtgcagttcgcgctcaaccccggcagcttcgaatatgccgtgatcgaagtcaac
ccgcgcgtgtcgcgctcttcggcgctggcctccaaggcgaccggctacccgatcgccaag
gtttcggcgcagatcgccatgggcctgcgccttgacgagatccccaacgccgtcaccggc
aagacgtcggctttcttcgagccggcgctggactacgtggtggtgaagatgccgcgctgg
cccttcgacaagttcagcagcgccacgcgcacgctgggaccgcagatgaaagccaccggc
gaagtgatggcgatcgcgccgacctttgaggaagctctgctcaaatcgctgcgcggcgcc
gagatcggtatggattcgccgcgcctcgcttccctgaaggagctcggcgacgatcagctc
gaggcctgcctgcgagagcctaccgaccagcggctgtccgtcgtgtacgaggctttgggc
cgcggcgtgtcggtcgatcacgtccacgacgtgacgaagatcgaccgctggttcctgtgg
aagctgaaaaaaatccttgccgtcgagagcgctttgcagaagtgcggcggcgtcctgccc
gacgaactgtacgccggcgccaaggcgacaggttttcttgaccgcacgatcgagaagctt
tcaggcgcgaaagtggaaaaacatttggcgccggtctaccgcatggtcgatacctgcgcc
gccgaatttgcggccgaaacgccttacttctacgccgccgctccggtctcgggcagcgaa
gacgaagcggccggattcatcgcccatcatgccggccttgtcgcctccaaagggaccatc
gtcgtcctcggcagcgggccgatccgcattggccagggcatcgagttcgactacgccgcc
gtgcactgcgtgtgggcgctgaagcgcctggggtacacggtcgtgatgatcaacaacaat
cccgagacggtcagcaccgatttcgacacggccgaccgcctttacttcgaaccgctcacg
ccggaggacgtgatggacatcatccgtctggaaaggcctctcggcgtggtcgtggccttt
ggcgggcagactgccatcaagctgacgaaatccctcagcgaaaacggcgtcgccatcctc
ggcaccagcgccgacgccatcgacgccgccgaggaccgcgagcgcttcgacgcgattctg
aaccgctgcggcatcgaccgccccagggggcatggcgtggaaacgctggagcaggcgctc
gacgccgcccgcgacatcggctaccccgtgctcgtgcgcccgtcctacgtgctggggggc
cagaacatgatcatcgcttacgacgacgaaagcgtcagcaattacatgcggcgtcttctc
gccatcggtaccgacggccccgtgctgatcgacaaatacctcgaaggcaccgaggttgaa
gtcgacgccgtttgcgacgggaccgacgtgctgattcccgggatcatggaacacatcgaa
cgcgccggagtccattccggcgacagcatcgccgcttatccggcctggaacctttccggc
cccgtcaccgaaaaattggtggagagcacagcccgcatcgccatcgaactgggcgtgaag
ggactggtcaacatccagtacgtgatctacaacaaccaagtttacgtgatcgagagcaat
ccccgcgccagccgcacgatcccttacatcagcaaagtcaccgggctgccgctggtggat
atcgccacgcaggtgatgctcgccacgctgacgcccgacgcgccgaagctgcgcgacctg
ccctgcggcacgggcctgtaccggcccagcccttactgcgccgtcaaggtgcccgtgttc
tccttcgaaaaactgagcggcgccgacgtgcagctggggccggaaatgaagtccactggc
gaagtgctcggcgtgggcaaaaatctcgaagaggccctgtacaaagggctgattgcggcc
ggttacgccgtgcgccatcatgaaccgggcggcgtgctgatcagcgtgcaagaccgcgac
aagcccgagatcgtggaactggcccgccgcctcgcttcgctgggctgccgcctttacacc
accggcggcaccgccgagtacctgaaaagccgtggcattcgcagcgcctcggtgggcaag
atcagccagggcaaccgcgatattccttatctgctcgatcagggacgcgtgcagtacgtg
ctctcgaccagctcgcccgacagcagcgagcgcgccgacgctcaggtgctgcgcagcaag
gccatcgagcgccgcgccgcctgcatgaccagcctcgacacggcccgcgctctcgtagac
tgtatggtcagcggttacgacgagggcaacgtggagctcgtcgacatggcccatttgccg
gaacgcaaacgtcccgtccattttgtcaagatgcgttgcggcggcaacgaatacatttat
gtcgatgcgatccgccagagcgtcgccgagccggccagcctcagcgtggccctgtgcggg
cggcggcgcagcgtcggcggcgatggtctcgtgatcgtcgccccggctcggggaaaagcc
gacgcgcgcatgatcctttacgatgccgacggcacgcgcgcccgcatcggcggcaacgcg
ctgcgcggcgtaggcaaatatgtttacgagaaactggacgtgaagaaaaaagatctgtcg
atcgaaaccgacgacggcgtcaaggcgcttcgcctttacgaccgcgacggcgagatctac
agcgtcgaggcgctgatcggccgacccgatttcgaccccgcgcgcgtgcccgtcacgctc
aacgccgacggccggcccgtggtcagtcagtattattcctgcggcggattcgacgatcag
attacctgcctgtcgctgggcgacccgcagtgcgtgattctgaccgacgactgcgacggc
gcggaactgaacgtggcgggcccgttgatggaacgcgcggagatatttccggaagggacc
aacgtcagctgcgtcagcgttgccgaccgccacacgctgcgggtgcgtacatgggagcgc
cgcatcggcgaaaccatgagctgcggcacttcggcctgcgccgcggccgtcgtcgcggcc
agactggggctggtagacgaaggcgagatctccgtgaggacggcgggggggctgctggtc
gtccgtctcgcgcccgaaggggtattcctgatcggcggcgtggactgcgactttgagggt
gtcatcgagatgtag
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