Pyramidobacter sp. YE332: RAH42_04990
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Entry
RAH42_04990 CDS
T09677
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_04990
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RAH42_04990
Archaeal homologous recombinant proteins
RAH42_04990
BRITE hierarchy
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WOL40997
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All DBs
Position
1066546..1067754
Genome browser
AA seq
402 aa
AA seq
DB search
MRILHTSDWHLGRKLCGQERADEFRQFLDWLTDTLICERVDALVVAGDVFDSYTPPLWAQ
SLYYRFLTGLSRTPCRSAVIVAGNHDSAALLDSPRELLDRLDVHVVGAPAAEPGAELFEL
PDAQGKTGALCCAVPFLRSRDLCGALVGEDADAIARAELDGFAKHYAAVCALAETRRAGR
DIPVVALGHCFAAGGTVRADDGVRDLAVGSLGAVPLSAFPENVDYLALGHLHAPQICGGL
ESRRYCGAPLCMGFGEAGQKKQVCVVDFDGRAVSVRAIDVPVWQEIRRLKGSFDEIAAAL
SELERSGRSVWVEADCADEGAQGLNDRIRELSGGAVKILRVKVAGAGPADAFSGAGDLNE
DWSPREVFRLYLNEHQIEGAEAEALTGAYLEALEAVRTEAAR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccttcacacgtcggactggcatctgggacgcaagctctgcggccaggagcgg
gccgacgaattccgccagtttctcgactggctgacggatacgctgatttgcgaacgtgtc
gacgcgctcgtcgtggcgggggacgttttcgattcctacacgccgcccttgtgggcgcag
agcctttattaccgttttctcacgggactgtcgcgcacgccctgccgcagcgcggtgatc
gtggccggcaatcacgattcggcggcgctgctcgactcgccccgggagctgctggaccgt
ctcgacgtccacgtcgtgggcgcgccggcggcggagcccggcgcggagcttttcgagctg
ccggacgcgcaggggaaaacgggcgcgttgtgctgcgccgtgccgtttctgcgctcgcgc
gacctctgcggcgcgcttgtcggcgaagacgccgacgcgatcgcgcgcgccgaactggac
ggcttcgcgaagcattacgccgccgtgtgcgcgctggccgaaacgcggcgcgcggggcgc
gatatccccgtcgtcgccctggggcactgctttgccgccggcggaaccgtgcgcgccgac
gacggcgtgcgcgacctggcggtcggttcactgggcgcggtgccgctgtcggcttttccc
gaaaacgtcgattatctggcgctggggcacctgcacgcgccgcagatctgcggcgggctc
gagagccgccgttattgcggcgcgccgctgtgcatgggcttcggcgaggcggggcagaaa
aagcaggtctgcgtcgtcgatttcgacgggcgcgccgtttcggtgcgcgcgatcgacgtg
cccgtgtggcaggagatccgccgcctgaaaggctccttcgacgagatcgccgccgctttg
agcgaactcgaacggtccggccgctccgtttgggtcgaagcggactgcgccgacgagggc
gctcagggactgaacgaccgtatccgcgagctgagcggcggcgcggtgaagatcctgcgc
gtcaaagtggcgggcgcggggccggcggacgctttttccggcgcgggcgacctgaacgag
gactggtcgccgcgcgaagtcttcaggctctatctgaacgagcaccagattgagggcgcg
gaagcggaggcgctgacgggcgcgtatctcgaggcgctcgaagccgtgcggacggaggcg
gcgcgatga
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