KEGG   Pyramidobacter sp. YE332: RAH42_05085
Entry
RAH42_05085       CDS       T09677                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pyy  Pyramidobacter sp. YE332
Pathway
pyy03030  DNA replication
pyy03430  Mismatch repair
pyy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pyy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RAH42_05085
   03430 Mismatch repair
    RAH42_05085
   03440 Homologous recombination
    RAH42_05085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyy03032]
    RAH42_05085
   03400 DNA repair and recombination proteins [BR:pyy03400]
    RAH42_05085
Enzymes [BR:pyy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RAH42_05085
DNA replication proteins [BR:pyy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RAH42_05085
DNA repair and recombination proteins [BR:pyy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RAH42_05085
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Auts2
Other DBs
NCBI-ProteinID: WOL41016
LinkDB
Position
complement(1090628..1091218)
AA seq 196 aa
MPLSIAETGFTALDIETTGLSPALCGIVEIAALKIFPDGSQRPFQMLVDPGRPIPRDVSA
IHGIDDAMVRGQPRAADAVAALVSFVGPSPLVLHNAPFDMSFLNPVVRRQRLQWSSPAVF
DTLRLSRQAFPGLNSYSLENLSRFFDFDAGGHHRALTDCRYCAQLFARILRKIRGLDMDF
AAFAREYASSARLLAR
NT seq 591 nt   +upstreamnt  +downstreamnt
atgcctctctccatcgccgaaacgggcttcaccgccctcgacatcgaaaccaccggattg
agtcccgccttgtgcggcatcgtcgagatcgccgctctgaaaatctttcccgatggctcg
cagcggccttttcaaatgctggtcgatcccgggcgccccatcccgcgcgacgtctccgcc
atccacggcatcgacgacgccatggtccgcggtcagccccgcgccgccgacgccgtcgcc
gcgctcgtgagcttcgtgggaccgtcgccgctggtgctgcacaacgcaccgttcgacatg
agctttctcaaccccgtcgtgcggcggcagcggctccagtggagcagccccgccgtcttc
gacacgctcaggctgagccgccaggcctttcccggactgaacagctacagcctggaaaac
ctgagccgcttcttcgacttcgacgccggcggccatcaccgcgcgctgaccgactgccgc
tactgcgctcagctcttcgcgcgcatcctgcgcaagatccgcgggctcgacatggatttc
gccgcgttcgcgcgcgagtacgcctcgtccgcccgcctgctcgcaaggtaa

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