Pyramidobacter sp. YE332: RAH42_05220
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Entry
RAH42_05220 CDS
T09677
Name
(GenBank) YadA-like family protein
Organism
pyy
Pyramidobacter sp. YE332
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Collagen
KASH_CCD
Motif
Other DBs
NCBI-ProteinID:
WOL41043
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All DBs
Position
1116143..1122814
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AA seq
2223 aa
AA seq
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MGSIYEEVENKARKCHAEAPGIVGVRRAAVLVCALALAVGSFEPSRASVIDESYVEIARG
AEANHTKAIAVGNKAKAKGEESIAIGYEAEANNPQQSNYAVPAIAIGSRARALKSNAIAF
GTLSTAHGNRSIAIGSGAVADDFTTSLGWMAGSTSKVKGEHGVIPVGKFKSSKESVFIGK
NAGRDIEGKDNVVIGNYGAEGVPEDGSYVQGNTPGDNAGHFVGITAIGRSALVKGDNGVA
LGKEAKAMGTSGVAVGHLANAKKNFDIALGYKAEAEGVPPSSSSTGGSAMALGTSAHAAG
MNAVSIGNGASATNTSTIALGGKAEGHSSTALGYVTQASGSSATAVGYYAQATGNQSTAL
GTIAKAETVGAVAIGNEAKAAASEGDVALGAGSETAAAVGTASYMVNGQTKNFAGTDPAS
TVSVGKAGTERTITNVAAGRISGNSTDAVNGSQLFGVIEEVNKGTKYGGDTGAVFTRRLG
EQTSVKGGKSTGLTENNIGVVSNGTDTLTVKLSKDVNLGSTGSLQAGGTTINSTGIATNQ
IVAGGTTINGTTFDAGNKQITNVASGGSVTNNAATIGDVNTIIGNKTKWTIKDGGSGSKE
INATTPLVVKGDAYVKTKVDNFGLHLSMDETKLNSTITNNTSITTINETLDKGLKFAGND
GVAVKRELGQTLSVKGGLSDVSANASGKNLGVKKNAAGDGLDLVMSEKPEFTEVTVGSTN
KVVLSEGKISIGGKDYITTAGLNANSQQIKNVKAGTEGTDAVNLNQVKSLVTAGAKPTTV
KGSDNIGVSDGANSQGGKEYTVSLKDSVTLGTDPAKKISIDGTAGKLTVGTKVTVNGATG
DIQAGTVKIAGAGTVNELTNRAWDIDNPTIVNGQAATEDQLKVVSDVVKTNTSNISNLTT
TVNNHTTDITNLKGGFTVSDGDGSVKPEIKLGETDKQNIQFKGEPDKIAVEVAKAADGAT
VTVKADPKLGETINISNNTSITSLKAGFDLADANGVKGSVELGGSNKQAVIFKATGVGDA
FTASVDADRNVTYSIDKTKLVNNITGDIITNINNGGTAITNIEGKFKVSDGTAANTKTLT
IGKNGAPEIQFKGEADKIDVEVSGSDSIPVVTVKADPKLGETINISNNTSITTINETLDK
GLKFAGNDGVAVKRELGQTLSVKGGLSDVSANASGKNLGVKKNAAGDGLDLVMSEKPEFT
EVTVGSTNKVVLSEGKISIGGKDYITTAGLNANNQKITNVEAGTSTKDAVNYGQLTAQIA
NSKTILKDGHNTTVEGEGTAAKPYKVNVKDDLVLGKAGADGKDGSIGINGKDGQSVVIHG
KDGISVKGKDGKDGVTIYAKDGADGTEGKIGLTGPKGSDGKNAKADIGINAGPASLDPAK
NLSATEMTRIYYTDEKGDHQVATMDDGMKYAGDNGQSDASKVIKKKLNNTLDIIGGASGA
LTDGNIGVNNVGGQLKVQLAQNLNLTAAGSLTIGDTLLNGSGLTITGGPKLTKTDVNMGG
LQIHGVAQGTSDTDAVNYGQLTAQIANSKTILKDGHNTTVEGEGTAAKPYKVNVKDDLVL
GKAGADGKDGSIGINGKDGQSVVIHGKDGISVKGKDGKDGVTIYAKDGADGTEGKIGLTG
PKGSDGENAKADIGINAGPASLDPAKNLSATEMTRIYYTDEKGDHQVATMDDGLKFAGDG
GTPVGRKLGETLKISGGADVSKLTDDNIGVITDPASGELKVKLAQNLNLGSAGSVTIGDT
LLNGSGLTITGGPVITKTNVNMGNQIVHGVANGAAATDAVNYGQLQAVENKIDQTSTTVN
KGLTFKADDTNTVNRKLGETLHVAGDGTNTETKVDGGKVVVALKNELKFDVTGTTNKLTI
NKDDKGTVNGLSNTTWNPLSITSGQAATEDQLKAVDDKIAAISADTLKSWDAQIDGVKVK
TVSKTDNVLNFKKGSNIKLSDDSGAIKISVVDAPNFAGKVTAKGFDAIGHKIENVKAGAV
NQTSGDAINGAQLWKTSSSIATHLGGGSSVTPDGTVSAPTYKFKYVNGGSYNTVGDALSA
VDRQFGNVYNNFGNVYNQMGELRSSIKTTGALGSALSALKPMHYDPVEPSQLMAGFGAYK
GEYALALGFAHYVKEDFMVHAGVSVSHHGESMANAGLTWKIGRKEDREAIPERYRKGPMN
SVYVMQKENAQLQAEVTSLKRTNAQQAETNALQSQEIAELKAMQAELKANMEEMRRLLRA
SRR
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatttacgaagaggtggaaaacaaggctcgaaaatgccatgcagaagcgccc
gggatcgtcggcgtaagacgcgccgcggtcctggtatgcgctctggcgttggccgtcggg
agctttgaaccgtcgcgggcgtcggtgatcgacgagagctatgtggagattgcgagaggg
gccgaggcgaatcatacgaaggcgatcgccgtcggcaataaggccaaagcaaagggagag
gaaagtatcgcgataggctacgaggcggaagccaacaatccgcagcaatctaattatgcg
gttccggcaatcgccatcggctcccgggcgcgggcgctgaaaagcaatgccatcgctttc
ggcacgctgagcaccgcgcacggcaaccgcagtatcgccatcggttccggcgcggtggcc
gacgactttacgacgtcgttgggctggatggccggctcgacgagcaaggtcaaaggagag
catggcgttattcccgtagggaagttcaaatcgagcaaagaaagcgtttttatcggaaag
aacgcaggccgcgacatcgaaggcaaggataacgtcgttatcggcaattatggggccgaa
ggcgttcccgaagatggctcttatgtacaaggcaacacgccgggcgacaacgcaggacat
ttcgtaggcatcacggcgatcggccggagcgctctggtcaaaggcgacaacggcgtggct
ctgggcaaggaagccaaggccatggggacctctggcgtggccgtaggtcatcttgccaat
gcaaaaaagaattttgacatagccttaggttacaaggctgaagccgaaggggttccccct
tcttccagtagcaccggcggttcggcaatggctttgggcacgagcgcccacgccgcgggt
atgaacgcggtcagcattggcaacggagcgtctgcgacgaatacttccaccatcgcactg
gggggcaaggccgaaggacacagttccacagcgcttggttatgtcacgcaggcgtccggc
tccagcgctacggcggtaggctattatgcccaggcgaccgggaaccagagcacggccctc
ggcacgatagccaaggccgaaacggtcggggccgtggccatcggtaacgaggccaaagcc
gcagcttccgaaggcgacgtcgctttgggtgccggctcggaaacagcggcagccgtggga
acggcttcctacatggttaacgggcagacgaagaattttgcgggaacagatccagcctct
accgtcagcgtgggcaaagccggcacggagcgcacgatcaccaacgtggcggccggacgc
atcagcggcaactctacggacgccgtcaacggcagccagctgttcggcgtcatcgaagaa
gtgaacaaaggaaccaaatacggcggagacacgggcgccgtctttacccgcagactgggc
gaacagaccagcgtcaagggcggcaagagcaccggcctgaccgaaaacaatatcggcgtg
gtttccaacggcacggacaccctcaccgtcaagctgtccaaagatgtgaacctgggcagt
acgggcagcctgcaggccggcggcaccacgatcaacagtaccggcatcgccaccaatcag
atcgtggcgggcggcacgacgatcaacggcaccacgttcgacgcgggcaacaagcagatc
accaacgtagccagcggcggcagcgttacgaacaatgcggctaccatcggcgacgtcaat
accattatcggcaataaaaccaagtggaccatcaaagacggaggcagcgggagcaaggaa
atcaacgctacgaccccgttggtcgtcaaaggcgacgcttacgtaaagaccaaagtggac
aactttggccttcacctgagcatggacgaaaccaagctgaacagcaccatcaccaacaac
accagcatcaccaccatcaacgagacattggacaaggggctgaaattcgccggcaacgac
ggagttgcagtcaagcgcgagcttgggcaaactctgagcgtcaagggcggattgtccgac
gtgagcgcgaacgcgtccggcaagaacctcggcgtgaagaagaacgccgccggtgacgga
ctcgacctcgtcatgagcgagaaacccgaattcacggaagtgaccgtcggctcgacgaac
aaagtcgttctgagcgaaggcaaaatcagcattggcggcaaggattacatcaccaccgcc
ggtctgaacgccaacagccagcaaatcaagaacgtaaaggccggcacggaaggaacggac
gcggtcaacctcaaccaggtgaagtccctggtcacggcgggggcgaagccgactacggtc
aagggcagcgataacatcggcgtgtccgatggcgcgaactcccagggcggcaaggaatac
accgtcagcctgaaagacagcgtaactctcggcactgatccggccaagaaaatctccatc
gacggaaccgccggcaaactcacagtcggcaccaaagtaaccgtcaacggcgccaccggc
gacatccaggcgggcacagtcaagatcgcgggcgcaggcacagtcaacgaactgacgaac
cgcgcctgggatatcgacaacccgacgatagtgaacggccaggccgctaccgaagaccag
ctgaaagtcgtcagcgacgtcgtgaagaccaacacgagcaacatcagcaacctgaccacc
acggtgaacaaccacaccaccgacatcaccaacctcaagggcggcttcaccgtgagcgac
ggagacggcagcgtcaaacccgaaatcaaactcggcgaaacggacaaacagaacatccag
ttcaaaggcgagccggacaagatcgccgtcgaagtcgccaaggccgccgacggagcgact
gtgaccgtgaaagccgacccgaagttgggcgagaccatcaacatcagcaacaacaccagc
atcaccagtctgaaggcgggcttcgaccttgccgacgccaacggagtgaagggcagcgtc
gaactgggcggaagcaacaagcaggcagtgatcttcaaggcaacgggagtcggcgatgcc
ttcacggcgagcgtcgacgccgaccgcaacgtgacctacagtatcgacaagaccaaactg
gtcaacaacattaccggcgacatcatcaccaatatcaacaacggcggcacggccatcacc
aacatcgaaggcaagttcaaggtgagcgacggcacggcggcgaacaccaagaccctcacc
atcggcaagaacggcgcgcccgagatccagttcaagggcgaagctgacaagatcgacgtc
gaagtgagcgggagcgattcaatccccgttgtgaccgtgaaagccgacccgaagttgggc
gagaccatcaacatcagcaataacaccagcatcaccaccatcaacgagacattggacaag
gggctgaaattcgccggcaacgacggagttgcagtcaagcgcgagcttgggcaaactctg
agcgtcaagggcggattgtccgacgtgagcgcgaacgcgtccggcaagaacctcggcgtg
aagaagaacgccgccggtgacggactcgacctcgtcatgagcgagaaacccgaattcacg
gaagtgaccgtcggctcgacgaacaaagtcgttctgagcgaaggcaaaatcagcattggc
ggcaaggattacatcaccaccgccggcctgaacgccaacaatcagaagatcaccaacgtg
gaagccggcacctcgaccaaggacgccgtcaactacggccagctgacagcgcagatcgcc
aacagcaagacgatcctgaaagacggccataatacgacagtcgaaggcgaaggcacggct
gccaagccgtacaaggtcaacgtcaaagacgatctcgtactgggcaaggcaggagccgac
ggtaaagacggttccatcggcatcaacggcaaagacggccaatccgtcgtaattcacggc
aaggacgggatcagcgtcaagggcaaagacggcaaagacggagtgaccatttatgccaaa
gacggcgcggacggaacggaaggcaagatcggcctgaccggcccgaagggctccgacggc
aagaacgccaaagccgacatcggcatcaatgccggccctgccagcctcgatccggcgaag
aacctgagcgccaccgagatgacccgcatctactacacggatgaaaagggcgatcaccaa
gttgcgacgatggacgacggcatgaagtacgccggcgacaacggccagagcgacgcgagc
aaagtcatcaagaagaaactgaacaacacgctcgacatcatcggcggagcctccggcgcg
ctgaccgacggcaacatcggcgtgaacaacgtcggcggccagctgaaagttcagctggcg
cagaacctcaacctgacggcagccggcagcctgaccatcggcgacactctgcttaacggc
agcggtctgacgattaccggcggccccaagctcaccaagacagacgtgaacatgggtggc
ctgcagatccacggcgtcgcccaaggcacgtccgacaccgatgccgtcaactacggccag
ctgacagcacagatcgccaacagcaagacgatcctgaaagacggccataatacgacagtc
gaaggcgaaggcacggctgccaagccgtacaaggtcaacgtcaaagacgatctcgtactg
ggcaaggcaggagccgacggtaaagacggttccatcggcatcaacggcaaagacggccaa
tccgtcgtaattcacggcaaggacgggatcagcgtcaagggcaaagacggcaaagacgga
gtgaccatttatgccaaagacggcgcggacggaacggaaggcaagatcggcctgaccggc
ccgaagggctccgacggcgagaacgccaaagccgacatcggcatcaatgccggccctgcc
agcctcgatccggcgaagaacctgagcgccaccgagatgacccgcatctactacacggat
gaaaagggcgatcaccaagtggcgacgatggacgacggcctgaaattcgccggcgacggc
gggacccccgtcggcagaaaactcggagagacgctgaaaatcagcggcggagcggacgtc
tcgaaacttacggacgacaatatcggcgtaatcaccgatcccgccagcggcgaactgaaa
gtgaaactggcgcagaacctgaacctgggaagcgccggcagcgtgaccatcggcgacact
ctgcttaacggcagcggcctgacgattaccggcggccccgtcatcaccaagaccaacgtg
aacatgggcaaccagatcgtccacggcgtcgccaacggcgccgccgcgaccgacgcggtc
aactacggccagctccaggccgtggagaacaagatcgaccagaccagcaccacagtgaac
aaaggcctcaccttcaaagccgacgataccaacaccgtcaacaggaaactcggcgagacc
ctccacgtcgccggcgacggcacgaacaccgagaccaaagtcgacggcggcaaagtcgtc
gtcgccctcaagaacgaactgaaattcgacgtgaccgggacgacaaacaaactcaccatc
aacaaggacgacaaaggcaccgtcaacggcctgagcaacacaacctggaaccccctgagc
atcacctccggccaggccgccaccgaagaccagctcaaagccgtggacgacaagatcgcc
gccatctccgccgacaccctgaaaagctgggacgcccagatcgacggagtgaaagtgaag
accgtcagcaagaccgacaacgtcctcaacttcaagaaaggcagcaacatcaaactgagc
gacgacagcggcgccatcaagatctccgtcgtcgacgcgccgaattttgccggcaaagtc
accgccaaaggcttcgacgccatcggccacaagatcgagaacgtcaaagccggagccgtg
aaccagaccagcggcgacgccatcaacggcgcgcagctgtggaagacctcgagcagcatc
gccacccacctcggcggcggctcctccgtcacccccgacggcaccgtctccgcccccacc
tacaagttcaagtacgtgaacggcggcagctacaacaccgtcggcgacgccttgagcgcc
gtagaccgccagttcggcaacgtctacaacaacttcggcaacgtctacaaccagatgggc
gaactgagaagcagcatcaagaccaccggagcgctcggctcggccttgagcgcgctcaaa
ccgatgcactacgaccccgtcgaacccagccagctcatggccggcttcggagcctacaaa
ggcgaatacgccctggcccttggctttgcgcactacgtgaaagaagacttcatggtgcac
gccggagtgtccgtctcgcaccacggcgagtcgatggccaacgccgggctgacgtggaag
atcggccgcaaggaagacagggaggcgatccccgaacgttaccgcaagggccccatgaac
agcgtctacgtgatgcagaaggagaacgctcagctgcaggccgaggtaacctcgctgaaa
cgcacgaacgcccagcaggccgaaacgaacgcgctacagagccaggagatcgccgaactg
aaggcgatgcaggcggaattgaaggcgaacatggaggaaatgaggcgtctgcttcgcgct
tcgcggcgctag
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